RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
PRDM16-206ENST00000511072 MT1LQ93083 61 aa4.7□□□□□ -1.66
PRDM16-206ENST00000511072 MT1EP04732 61 aa4.67□□□□□ -1.66
PRDM16-206ENST00000511072 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
PRDM16-206ENST00000511072 KMT2DO14686 5537 aa4.66□□□□□ -1.66
PRDM16-206ENST00000511072 SPRR2DP22532 72 aa4.64□□□□□ -1.67
PRDM16-206ENST00000511072 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
PRDM16-206ENST00000511072 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
PRDM16-206ENST00000511072 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
PRDM16-206ENST00000511072 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
PRDM16-206ENST00000511072 USH2AO75445 5202 aa4.59□□□□□ -1.67
PRDM16-206ENST00000511072 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
PRDM16-206ENST00000511072 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
PRDM16-206ENST00000511072 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
PRDM16-206ENST00000511072 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
PRDM16-206ENST00000511072 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
PRDM16-206ENST00000511072 MT1MQ8N339 61 aa4.5□□□□□ -1.69
PRDM16-206ENST00000511072 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
PRDM16-206ENST00000511072 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
PRDM16-206ENST00000511072 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
PRDM16-206ENST00000511072 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
PRDM16-206ENST00000511072 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
PRDM16-206ENST00000511072 LCE2DQ5TA82 110 aaPredicted RBP4.28□□□□□ -1.72
PRDM16-206ENST00000511072 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
PRDM16-206ENST00000511072 MT4P47944 62 aa4.27□□□□□ -1.73
PRDM16-206ENST00000511072 PRM1P04553 51 aa4.26□□□□□ -1.73
PRDM16-206ENST00000511072 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
PRDM16-206ENST00000511072 MT3P25713 68 aa4.19□□□□□ -1.74
PRDM16-206ENST00000511072 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
PRDM16-206ENST00000511072 MT1AP04731 61 aa4.08□□□□□ -1.76
PRDM16-206ENST00000511072 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
PRDM16-206ENST00000511072 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
PRDM16-206ENST00000511072 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
PRDM16-206ENST00000511072 MDN1Q9NU22 5596 aa4□□□□□ -1.77
PRDM16-206ENST00000511072 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
PRDM16-206ENST00000511072 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
PRDM16-206ENST00000511072 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
PRDM16-206ENST00000511072 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
PRDM16-206ENST00000511072 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
PRDM16-206ENST00000511072 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
PRDM16-206ENST00000511072 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
PRDM16-206ENST00000511072 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
PRDM16-206ENST00000511072 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
PRDM16-206ENST00000511072 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
PRDM16-206ENST00000511072 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
PRDM16-206ENST00000511072 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
PRDM16-206ENST00000511072 NEBP20929 6669 aa3.58□□□□□ -1.84
PRDM16-206ENST00000511072 LCE4AQ5TA78 99 aa3.53□□□□□ -1.85
PRDM16-206ENST00000511072 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
PRDM16-206ENST00000511072 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
PRDM16-206ENST00000511072 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
PRDM16-206ENST00000511072 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
PRDM16-206ENST00000511072 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
PRDM16-206ENST00000511072 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
PRDM16-206ENST00000511072 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
PRDM16-206ENST00000511072 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
PRDM16-206ENST00000511072 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
PRDM16-206ENST00000511072 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
PRDM16-206ENST00000511072 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
PRDM16-206ENST00000511072 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
PRDM16-206ENST00000511072 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
PRDM16-206ENST00000511072 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
PRDM16-206ENST00000511072 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
PRDM16-206ENST00000511072 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.98
PRDM16-206ENST00000511072 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
PRDM16-206ENST00000511072 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
PRDM16-206ENST00000511072 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
PRDM16-206ENST00000511072 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
PRDM16-206ENST00000511072 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PRDM16-206ENST00000511072 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
PRDM16-206ENST00000511072 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
PRDM16-206ENST00000511072 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
PRDM16-206ENST00000511072 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
PRDM16-206ENST00000511072 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
PRDM16-206ENST00000511072 PHGR1C9JFL3 82 aa2□□□□□ -2.09
PRDM16-206ENST00000511072 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
PRDM16-206ENST00000511072 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 7.7 ms