RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 PKHD1P08F94 4074 aa3.16□□□□□ -1.9
NEK1-206ENST00000510533 MT4P47944 62 aa3.15□□□□□ -1.9
NEK1-206ENST00000510533 TNXBP22105 4242 aa3.14□□□□□ -1.91
NEK1-206ENST00000510533 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
NEK1-206ENST00000510533 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
NEK1-206ENST00000510533 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
NEK1-206ENST00000510533 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
NEK1-206ENST00000510533 LCE1DQ5T752 114 aa3.09□□□□□ -1.92
NEK1-206ENST00000510533 MT1AP04731 61 aa3.08□□□□□ -1.92
NEK1-206ENST00000510533 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
NEK1-206ENST00000510533 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
NEK1-206ENST00000510533 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
NEK1-206ENST00000510533 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
NEK1-206ENST00000510533 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
NEK1-206ENST00000510533 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
NEK1-206ENST00000510533 UBR4Q5T4S7 5183 aa2.96□□□□□ -1.94
NEK1-206ENST00000510533 FAT4Q6V0I7 4981 aa2.96□□□□□ -1.94
NEK1-206ENST00000510533 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
NEK1-206ENST00000510533 LCE2AQ5TA79 106 aaPredicted RBP2.95□□□□□ -1.94
NEK1-206ENST00000510533 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
NEK1-206ENST00000510533 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
NEK1-206ENST00000510533 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
NEK1-206ENST00000510533 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
NEK1-206ENST00000510533 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
NEK1-206ENST00000510533 MUC2Q02817 5179 aa2.85□□□□□ -1.95
NEK1-206ENST00000510533 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
NEK1-206ENST00000510533 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
NEK1-206ENST00000510533 SYNE2Q8WXH0 6885 aaKnown RBP2.83□□□□□ -1.96
NEK1-206ENST00000510533 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
NEK1-206ENST00000510533 KRTAP9-6A0A140TA67 174 aa2.8□□□□□ -1.96
NEK1-206ENST00000510533 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
NEK1-206ENST00000510533 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
NEK1-206ENST00000510533 KRTAP9-7A8MTY7 169 aa2.74□□□□□ -1.97
NEK1-206ENST00000510533 LCE4AQ5TA78 99 aa2.71□□□□□ -1.98
NEK1-206ENST00000510533 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
NEK1-206ENST00000510533 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
NEK1-206ENST00000510533 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
NEK1-206ENST00000510533 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
NEK1-206ENST00000510533 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
NEK1-206ENST00000510533 USH2AO75445 5202 aa2.58□□□□□ -2
NEK1-206ENST00000510533 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
NEK1-206ENST00000510533 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
NEK1-206ENST00000510533 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
NEK1-206ENST00000510533 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
NEK1-206ENST00000510533 KMT2DO14686 5537 aa2.36□□□□□ -2.03
NEK1-206ENST00000510533 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.03
NEK1-206ENST00000510533 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
NEK1-206ENST00000510533 NEBP20929 6669 aa2.29□□□□□ -2.04
NEK1-206ENST00000510533 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
NEK1-206ENST00000510533 KRTAP4-6Q9BYQ5 205 aa2.29□□□□□ -2.04
NEK1-206ENST00000510533 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
NEK1-206ENST00000510533 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
NEK1-206ENST00000510533 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
NEK1-206ENST00000510533 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
NEK1-206ENST00000510533 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
NEK1-206ENST00000510533 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
NEK1-206ENST00000510533 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.07
NEK1-206ENST00000510533 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.07
NEK1-206ENST00000510533 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
NEK1-206ENST00000510533 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.08
NEK1-206ENST00000510533 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
NEK1-206ENST00000510533 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
NEK1-206ENST00000510533 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
NEK1-206ENST00000510533 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
NEK1-206ENST00000510533 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
NEK1-206ENST00000510533 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
NEK1-206ENST00000510533 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
NEK1-206ENST00000510533 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
NEK1-206ENST00000510533 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
NEK1-206ENST00000510533 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
NEK1-206ENST00000510533 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
NEK1-206ENST00000510533 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
NEK1-206ENST00000510533 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
NEK1-206ENST00000510533 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
NEK1-206ENST00000510533 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
NEK1-206ENST00000510533 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
NEK1-206ENST00000510533 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 258.2 ms