RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 SPRR2AP35326 72 aa4.98□□□□□ -1.61
USP38-202ENST00000510377 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
USP38-202ENST00000510377 MT1EP04732 61 aa4.94□□□□□ -1.62
USP38-202ENST00000510377 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
USP38-202ENST00000510377 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
USP38-202ENST00000510377 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
USP38-202ENST00000510377 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
USP38-202ENST00000510377 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
USP38-202ENST00000510377 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.63
USP38-202ENST00000510377 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
USP38-202ENST00000510377 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
USP38-202ENST00000510377 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
USP38-202ENST00000510377 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
USP38-202ENST00000510377 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
USP38-202ENST00000510377 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
USP38-202ENST00000510377 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
USP38-202ENST00000510377 SPRR2DP22532 72 aa4.79□□□□□ -1.64
USP38-202ENST00000510377 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
USP38-202ENST00000510377 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
USP38-202ENST00000510377 MT1MQ8N339 61 aa4.67□□□□□ -1.66
USP38-202ENST00000510377 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
USP38-202ENST00000510377 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
USP38-202ENST00000510377 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
USP38-202ENST00000510377 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
USP38-202ENST00000510377 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
USP38-202ENST00000510377 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
USP38-202ENST00000510377 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
USP38-202ENST00000510377 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
USP38-202ENST00000510377 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
USP38-202ENST00000510377 PRM1P04553 51 aa4.36□□□□□ -1.71
USP38-202ENST00000510377 MT4P47944 62 aa4.35□□□□□ -1.71
USP38-202ENST00000510377 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
USP38-202ENST00000510377 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
USP38-202ENST00000510377 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
USP38-202ENST00000510377 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
USP38-202ENST00000510377 MT1AP04731 61 aa4.21□□□□□ -1.74
USP38-202ENST00000510377 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
USP38-202ENST00000510377 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
USP38-202ENST00000510377 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
USP38-202ENST00000510377 NEBP20929 6669 aa4.02□□□□□ -1.77
USP38-202ENST00000510377 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
USP38-202ENST00000510377 MT3P25713 68 aa4.01□□□□□ -1.77
USP38-202ENST00000510377 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
USP38-202ENST00000510377 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.78
USP38-202ENST00000510377 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
USP38-202ENST00000510377 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
USP38-202ENST00000510377 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
USP38-202ENST00000510377 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
USP38-202ENST00000510377 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
USP38-202ENST00000510377 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
USP38-202ENST00000510377 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
USP38-202ENST00000510377 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
USP38-202ENST00000510377 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
USP38-202ENST00000510377 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
USP38-202ENST00000510377 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
USP38-202ENST00000510377 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
USP38-202ENST00000510377 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
USP38-202ENST00000510377 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
USP38-202ENST00000510377 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
USP38-202ENST00000510377 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
USP38-202ENST00000510377 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
USP38-202ENST00000510377 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
USP38-202ENST00000510377 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
USP38-202ENST00000510377 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
USP38-202ENST00000510377 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
USP38-202ENST00000510377 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
USP38-202ENST00000510377 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
USP38-202ENST00000510377 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
USP38-202ENST00000510377 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
USP38-202ENST00000510377 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
USP38-202ENST00000510377 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
USP38-202ENST00000510377 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
USP38-202ENST00000510377 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
USP38-202ENST00000510377 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
USP38-202ENST00000510377 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
USP38-202ENST00000510377 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
USP38-202ENST00000510377 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 71.5 ms