RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MT1BP07438 61 aa2□□□□□ -2.09
PDLIM5-214ENST00000510099 TNP1P09430 55 aa1.99□□□□□ -2.09
PDLIM5-214ENST00000510099 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
PDLIM5-214ENST00000510099 USH2AO75445 5202 aa1.96□□□□□ -2.09
PDLIM5-214ENST00000510099 MT1XP80297 61 aa1.96□□□□□ -2.1
PDLIM5-214ENST00000510099 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
PDLIM5-214ENST00000510099 MT3P25713 68 aa1.91□□□□□ -2.1
PDLIM5-214ENST00000510099 LCE3AQ5TA76 89 aa1.91□□□□□ -2.1
PDLIM5-214ENST00000510099 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
PDLIM5-214ENST00000510099 KRTAP10-12P60413 245 aa1.89□□□□□ -2.11
PDLIM5-214ENST00000510099 KRTAP8-1Q8IUC2 63 aa1.88□□□□□ -2.11
PDLIM5-214ENST00000510099 SSPOA2VEC9 5147 aa1.88□□□□□ -2.11
PDLIM5-214ENST00000510099 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
PDLIM5-214ENST00000510099 NDUFAF8A1L188 74 aa1.84□□□□□ -2.11
PDLIM5-214ENST00000510099 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
PDLIM5-214ENST00000510099 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
PDLIM5-214ENST00000510099 KMT2DO14686 5537 aa1.8□□□□□ -2.12
PDLIM5-214ENST00000510099 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
PDLIM5-214ENST00000510099 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
PDLIM5-214ENST00000510099 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
PDLIM5-214ENST00000510099 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
PDLIM5-214ENST00000510099 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
PDLIM5-214ENST00000510099 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
PDLIM5-214ENST00000510099 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
PDLIM5-214ENST00000510099 MT1EP04732 61 aa1.71□□□□□ -2.14
PDLIM5-214ENST00000510099 LCE3CQ5T5A8 94 aa1.71□□□□□ -2.14
PDLIM5-214ENST00000510099 LCE1FQ5T754 118 aa1.7□□□□□ -2.14
PDLIM5-214ENST00000510099 MT1LQ93083 61 aa1.7□□□□□ -2.14
PDLIM5-214ENST00000510099 FSIP2Q5CZC0 6907 aa1.67□□□□□ -2.14
PDLIM5-214ENST00000510099 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.14
PDLIM5-214ENST00000510099 A0A0A0MQY5 61 aa1.63□□□□□ -2.15
PDLIM5-214ENST00000510099 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
PDLIM5-214ENST00000510099 MT1MQ8N339 61 aa1.6□□□□□ -2.15
PDLIM5-214ENST00000510099 MT1GP13640 62 aa1.59□□□□□ -2.15
PDLIM5-214ENST00000510099 MDN1Q9NU22 5596 aa1.59□□□□□ -2.15
PDLIM5-214ENST00000510099 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
PDLIM5-214ENST00000510099 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
PDLIM5-214ENST00000510099 MACF1Q9UPN3 7388 aaKnown RBP1.58□□□□□ -2.16
PDLIM5-214ENST00000510099 KRTAP2-3P0C7H8 128 aa1.57□□□□□ -2.16
PDLIM5-214ENST00000510099 KRTAP2-4Q9BYR9 128 aa1.57□□□□□ -2.16
PDLIM5-214ENST00000510099 KRTAP2-1Q9BYU5 128 aa1.57□□□□□ -2.16
PDLIM5-214ENST00000510099 INE1O15225 51 aa1.52□□□□□ -2.17
PDLIM5-214ENST00000510099 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
PDLIM5-214ENST00000510099 SYNE2Q8WXH0 6885 aaKnown RBP1.52□□□□□ -2.17
PDLIM5-214ENST00000510099 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
PDLIM5-214ENST00000510099 SPRR2EP22531 72 aa1.48□□□□□ -2.17
PDLIM5-214ENST00000510099 SPRR2BP35325 72 aa1.48□□□□□ -2.17
PDLIM5-214ENST00000510099 SPRR2AP35326 72 aa1.48□□□□□ -2.17
PDLIM5-214ENST00000510099 KRTAP5-5Q701N2 237 aaPredicted RBP1.48□□□□□ -2.17
PDLIM5-214ENST00000510099 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
PDLIM5-214ENST00000510099 NEBP20929 6669 aa1.44□□□□□ -2.18
PDLIM5-214ENST00000510099 MT1AP04731 61 aa1.44□□□□□ -2.18
PDLIM5-214ENST00000510099 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
PDLIM5-214ENST00000510099 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
PDLIM5-214ENST00000510099 SPRR2DP22532 72 aa1.42□□□□□ -2.18
PDLIM5-214ENST00000510099 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
PDLIM5-214ENST00000510099 DSTQ03001 7570 aaKnown RBP1.42□□□□□ -2.18
PDLIM5-214ENST00000510099 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
PDLIM5-214ENST00000510099 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
PDLIM5-214ENST00000510099 LCE3DQ9BYE3 92 aa1.29□□□□□ -2.2
PDLIM5-214ENST00000510099 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
PDLIM5-214ENST00000510099 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
PDLIM5-214ENST00000510099 KRTAP20-2Q3LI61 65 aa1.23□□□□□ -2.21
PDLIM5-214ENST00000510099 MT4P47944 62 aa1.22□□□□□ -2.21
PDLIM5-214ENST00000510099 KRTAP20-1Q3LI63 56 aa1.21□□□□□ -2.22
PDLIM5-214ENST00000510099 PRM1P04553 51 aa1.16□□□□□ -2.22
PDLIM5-214ENST00000510099 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
PDLIM5-214ENST00000510099 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
PDLIM5-214ENST00000510099 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
PDLIM5-214ENST00000510099 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
PDLIM5-214ENST00000510099 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
PDLIM5-214ENST00000510099 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
PDLIM5-214ENST00000510099 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
PDLIM5-214ENST00000510099 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
PDLIM5-214ENST00000510099 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
PDLIM5-214ENST00000510099 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
PDLIM5-214ENST00000510099 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
PDLIM5-214ENST00000510099 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 8.3 ms