RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
MATR3-237ENST00000509990 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
MATR3-237ENST00000509990 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
MATR3-237ENST00000509990 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
MATR3-237ENST00000509990 MT1EP04732 61 aa4.27□□□□□ -1.73
MATR3-237ENST00000509990 MT1LQ93083 61 aa4.26□□□□□ -1.73
MATR3-237ENST00000509990 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
MATR3-237ENST00000509990 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
MATR3-237ENST00000509990 MT1GP13640 62 aa4.19□□□□□ -1.74
MATR3-237ENST00000509990 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
MATR3-237ENST00000509990 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
MATR3-237ENST00000509990 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
MATR3-237ENST00000509990 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
MATR3-237ENST00000509990 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
MATR3-237ENST00000509990 MT1MQ8N339 61 aa4.02□□□□□ -1.77
MATR3-237ENST00000509990 LCE1FQ5T754 118 aa4□□□□□ -1.77
MATR3-237ENST00000509990 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
MATR3-237ENST00000509990 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
MATR3-237ENST00000509990 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
MATR3-237ENST00000509990 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
MATR3-237ENST00000509990 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
MATR3-237ENST00000509990 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
MATR3-237ENST00000509990 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
MATR3-237ENST00000509990 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
MATR3-237ENST00000509990 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
MATR3-237ENST00000509990 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
MATR3-237ENST00000509990 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
MATR3-237ENST00000509990 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
MATR3-237ENST00000509990 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
MATR3-237ENST00000509990 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
MATR3-237ENST00000509990 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
MATR3-237ENST00000509990 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
MATR3-237ENST00000509990 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
MATR3-237ENST00000509990 SPRR2EP22531 72 aa3.72□□□□□ -1.81
MATR3-237ENST00000509990 SPRR2BP35325 72 aa3.72□□□□□ -1.81
MATR3-237ENST00000509990 SPRR2AP35326 72 aa3.72□□□□□ -1.81
MATR3-237ENST00000509990 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
MATR3-237ENST00000509990 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
MATR3-237ENST00000509990 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
MATR3-237ENST00000509990 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
MATR3-237ENST00000509990 SPRR2DP22532 72 aa3.53□□□□□ -1.84
MATR3-237ENST00000509990 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
MATR3-237ENST00000509990 MT1AP04731 61 aa3.48□□□□□ -1.85
MATR3-237ENST00000509990 PRM1P04553 51 aa3.46□□□□□ -1.86
MATR3-237ENST00000509990 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
MATR3-237ENST00000509990 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
MATR3-237ENST00000509990 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
MATR3-237ENST00000509990 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
MATR3-237ENST00000509990 MT4P47944 62 aa3.32□□□□□ -1.88
MATR3-237ENST00000509990 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
MATR3-237ENST00000509990 NEBP20929 6669 aa3.3□□□□□ -1.88
MATR3-237ENST00000509990 MT3P25713 68 aa3.24□□□□□ -1.89
MATR3-237ENST00000509990 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
MATR3-237ENST00000509990 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
MATR3-237ENST00000509990 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
MATR3-237ENST00000509990 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
MATR3-237ENST00000509990 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
MATR3-237ENST00000509990 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
MATR3-237ENST00000509990 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
MATR3-237ENST00000509990 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
MATR3-237ENST00000509990 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
MATR3-237ENST00000509990 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
MATR3-237ENST00000509990 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
MATR3-237ENST00000509990 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
MATR3-237ENST00000509990 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
MATR3-237ENST00000509990 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
MATR3-237ENST00000509990 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
MATR3-237ENST00000509990 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
MATR3-237ENST00000509990 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
MATR3-237ENST00000509990 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
MATR3-237ENST00000509990 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
MATR3-237ENST00000509990 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
MATR3-237ENST00000509990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
MATR3-237ENST00000509990 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
MATR3-237ENST00000509990 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
MATR3-237ENST00000509990 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
MATR3-237ENST00000509990 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 65.5 ms