RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
CAST-228ENST00000509903 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
CAST-228ENST00000509903 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
CAST-228ENST00000509903 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
CAST-228ENST00000509903 FSIP2Q5CZC0 6907 aa3.07□□□□□ -1.92
CAST-228ENST00000509903 NEBP20929 6669 aa3.05□□□□□ -1.92
CAST-228ENST00000509903 MT1BP07438 61 aa3.04□□□□□ -1.92
CAST-228ENST00000509903 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
CAST-228ENST00000509903 MT1XP80297 61 aa3.01□□□□□ -1.93
CAST-228ENST00000509903 KRTAP10-5P60370 271 aa3□□□□□ -1.93
CAST-228ENST00000509903 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
CAST-228ENST00000509903 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
CAST-228ENST00000509903 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
CAST-228ENST00000509903 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
CAST-228ENST00000509903 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
CAST-228ENST00000509903 USH2AO75445 5202 aa2.87□□□□□ -1.95
CAST-228ENST00000509903 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
CAST-228ENST00000509903 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
CAST-228ENST00000509903 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
CAST-228ENST00000509903 KMT2DO14686 5537 aa2.78□□□□□ -1.96
CAST-228ENST00000509903 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
CAST-228ENST00000509903 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
CAST-228ENST00000509903 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
CAST-228ENST00000509903 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
CAST-228ENST00000509903 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
CAST-228ENST00000509903 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
CAST-228ENST00000509903 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
CAST-228ENST00000509903 KRTAP19-6Q3LI70 58 aa2.63□□□□□ -1.99
CAST-228ENST00000509903 MT1EP04732 61 aa2.61□□□□□ -1.99
CAST-228ENST00000509903 INE1O15225 51 aa2.6□□□□□ -1.99
CAST-228ENST00000509903 MT1LQ93083 61 aa2.6□□□□□ -1.99
CAST-228ENST00000509903 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
CAST-228ENST00000509903 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
CAST-228ENST00000509903 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
CAST-228ENST00000509903 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
CAST-228ENST00000509903 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
CAST-228ENST00000509903 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
CAST-228ENST00000509903 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CAST-228ENST00000509903 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
CAST-228ENST00000509903 MT1GP13640 62 aa2.46□□□□□ -2.02
CAST-228ENST00000509903 MT1MQ8N339 61 aa2.44□□□□□ -2.02
CAST-228ENST00000509903 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
CAST-228ENST00000509903 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
CAST-228ENST00000509903 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
CAST-228ENST00000509903 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
CAST-228ENST00000509903 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.04
CAST-228ENST00000509903 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
CAST-228ENST00000509903 SPRR2EP22531 72 aa2.32□□□□□ -2.04
CAST-228ENST00000509903 SPRR2BP35325 72 aa2.32□□□□□ -2.04
CAST-228ENST00000509903 SPRR2AP35326 72 aa2.32□□□□□ -2.04
CAST-228ENST00000509903 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
CAST-228ENST00000509903 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CAST-228ENST00000509903 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
CAST-228ENST00000509903 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
CAST-228ENST00000509903 MT1AP04731 61 aa2.2□□□□□ -2.06
CAST-228ENST00000509903 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
CAST-228ENST00000509903 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
CAST-228ENST00000509903 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
CAST-228ENST00000509903 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
CAST-228ENST00000509903 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
CAST-228ENST00000509903 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
CAST-228ENST00000509903 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
CAST-228ENST00000509903 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
CAST-228ENST00000509903 MT4P47944 62 aa1.96□□□□□ -2.1
CAST-228ENST00000509903 PRM1P04553 51 aa1.94□□□□□ -2.1
CAST-228ENST00000509903 OBSCNQ5VST9 7968 aa1.92□□□□□ -2.1
CAST-228ENST00000509903 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
CAST-228ENST00000509903 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
CAST-228ENST00000509903 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
CAST-228ENST00000509903 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
CAST-228ENST00000509903 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
CAST-228ENST00000509903 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
CAST-228ENST00000509903 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CAST-228ENST00000509903 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
CAST-228ENST00000509903 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
CAST-228ENST00000509903 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
CAST-228ENST00000509903 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms