RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
SEC24D-209ENST00000509818 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
SEC24D-209ENST00000509818 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
SEC24D-209ENST00000509818 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
SEC24D-209ENST00000509818 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
SEC24D-209ENST00000509818 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
SEC24D-209ENST00000509818 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
SEC24D-209ENST00000509818 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
SEC24D-209ENST00000509818 NEBP20929 6669 aa3.45□□□□□ -1.86
SEC24D-209ENST00000509818 KMT2DO14686 5537 aa3.44□□□□□ -1.86
SEC24D-209ENST00000509818 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
SEC24D-209ENST00000509818 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
SEC24D-209ENST00000509818 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
SEC24D-209ENST00000509818 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
SEC24D-209ENST00000509818 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
SEC24D-209ENST00000509818 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
SEC24D-209ENST00000509818 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
SEC24D-209ENST00000509818 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
SEC24D-209ENST00000509818 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
SEC24D-209ENST00000509818 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
SEC24D-209ENST00000509818 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
SEC24D-209ENST00000509818 MT1EP04732 61 aa3.24□□□□□ -1.89
SEC24D-209ENST00000509818 MT1LQ93083 61 aa3.2□□□□□ -1.9
SEC24D-209ENST00000509818 SPRR2EP22531 72 aa3.2□□□□□ -1.9
SEC24D-209ENST00000509818 SPRR2BP35325 72 aa3.2□□□□□ -1.9
SEC24D-209ENST00000509818 SPRR2AP35326 72 aa3.2□□□□□ -1.9
SEC24D-209ENST00000509818 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
SEC24D-209ENST00000509818 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
SEC24D-209ENST00000509818 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
SEC24D-209ENST00000509818 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.91
SEC24D-209ENST00000509818 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.91
SEC24D-209ENST00000509818 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
SEC24D-209ENST00000509818 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
SEC24D-209ENST00000509818 MT1GP13640 62 aa3.09□□□□□ -1.91
SEC24D-209ENST00000509818 SPRR2DP22532 72 aa3.08□□□□□ -1.92
SEC24D-209ENST00000509818 MT1MQ8N339 61 aa3.05□□□□□ -1.92
SEC24D-209ENST00000509818 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
SEC24D-209ENST00000509818 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
SEC24D-209ENST00000509818 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
SEC24D-209ENST00000509818 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
SEC24D-209ENST00000509818 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
SEC24D-209ENST00000509818 MT3P25713 68 aa2.85□□□□□ -1.95
SEC24D-209ENST00000509818 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
SEC24D-209ENST00000509818 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
SEC24D-209ENST00000509818 MT4P47944 62 aa2.73□□□□□ -1.97
SEC24D-209ENST00000509818 MT1AP04731 61 aa2.73□□□□□ -1.97
SEC24D-209ENST00000509818 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
SEC24D-209ENST00000509818 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
SEC24D-209ENST00000509818 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
SEC24D-209ENST00000509818 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
SEC24D-209ENST00000509818 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
SEC24D-209ENST00000509818 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
SEC24D-209ENST00000509818 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
SEC24D-209ENST00000509818 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
SEC24D-209ENST00000509818 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
SEC24D-209ENST00000509818 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
SEC24D-209ENST00000509818 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
SEC24D-209ENST00000509818 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
SEC24D-209ENST00000509818 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
SEC24D-209ENST00000509818 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
SEC24D-209ENST00000509818 PRM1P04553 51 aa2.38□□□□□ -2.03
SEC24D-209ENST00000509818 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SEC24D-209ENST00000509818 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
SEC24D-209ENST00000509818 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
SEC24D-209ENST00000509818 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
SEC24D-209ENST00000509818 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
SEC24D-209ENST00000509818 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
SEC24D-209ENST00000509818 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
SEC24D-209ENST00000509818 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
SEC24D-209ENST00000509818 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.09
SEC24D-209ENST00000509818 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SEC24D-209ENST00000509818 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
SEC24D-209ENST00000509818 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SEC24D-209ENST00000509818 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
SEC24D-209ENST00000509818 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
SEC24D-209ENST00000509818 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
SEC24D-209ENST00000509818 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
SEC24D-209ENST00000509818 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 152.7 ms