RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
PHF3-209ENST00000509330 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
PHF3-209ENST00000509330 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
PHF3-209ENST00000509330 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
PHF3-209ENST00000509330 MDN1Q9NU22 5596 aa5.09□□□□□ -1.6
PHF3-209ENST00000509330 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
PHF3-209ENST00000509330 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
PHF3-209ENST00000509330 MT1MQ8N339 61 aa4.98□□□□□ -1.61
PHF3-209ENST00000509330 MT1GP13640 62 aa4.96□□□□□ -1.61
PHF3-209ENST00000509330 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
PHF3-209ENST00000509330 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
PHF3-209ENST00000509330 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
PHF3-209ENST00000509330 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
PHF3-209ENST00000509330 SPRR2EP22531 72 aa4.76□□□□□ -1.65
PHF3-209ENST00000509330 SPRR2BP35325 72 aa4.76□□□□□ -1.65
PHF3-209ENST00000509330 SPRR2AP35326 72 aa4.76□□□□□ -1.65
PHF3-209ENST00000509330 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
PHF3-209ENST00000509330 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
PHF3-209ENST00000509330 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
PHF3-209ENST00000509330 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
PHF3-209ENST00000509330 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
PHF3-209ENST00000509330 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
PHF3-209ENST00000509330 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
PHF3-209ENST00000509330 SPRR2DP22532 72 aa4.56□□□□□ -1.68
PHF3-209ENST00000509330 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
PHF3-209ENST00000509330 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
PHF3-209ENST00000509330 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
PHF3-209ENST00000509330 INE1O15225 51 aa4.47□□□□□ -1.69
PHF3-209ENST00000509330 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
PHF3-209ENST00000509330 NEBP20929 6669 aa4.39□□□□□ -1.71
PHF3-209ENST00000509330 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
PHF3-209ENST00000509330 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
PHF3-209ENST00000509330 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
PHF3-209ENST00000509330 MT1AP04731 61 aa4.38□□□□□ -1.71
PHF3-209ENST00000509330 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
PHF3-209ENST00000509330 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
PHF3-209ENST00000509330 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
PHF3-209ENST00000509330 MT4P47944 62 aa4.09□□□□□ -1.75
PHF3-209ENST00000509330 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
PHF3-209ENST00000509330 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
PHF3-209ENST00000509330 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
PHF3-209ENST00000509330 MT3P25713 68 aa3.96□□□□□ -1.78
PHF3-209ENST00000509330 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
PHF3-209ENST00000509330 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
PHF3-209ENST00000509330 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
PHF3-209ENST00000509330 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
PHF3-209ENST00000509330 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
PHF3-209ENST00000509330 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
PHF3-209ENST00000509330 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
PHF3-209ENST00000509330 PRM1P04553 51 aa3.67□□□□□ -1.82
PHF3-209ENST00000509330 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
PHF3-209ENST00000509330 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
PHF3-209ENST00000509330 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
PHF3-209ENST00000509330 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
PHF3-209ENST00000509330 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
PHF3-209ENST00000509330 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
PHF3-209ENST00000509330 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
PHF3-209ENST00000509330 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
PHF3-209ENST00000509330 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
PHF3-209ENST00000509330 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
PHF3-209ENST00000509330 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
PHF3-209ENST00000509330 LCE1CQ5T751 118 aa3.09□□□□□ -1.92
PHF3-209ENST00000509330 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
PHF3-209ENST00000509330 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
PHF3-209ENST00000509330 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
PHF3-209ENST00000509330 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
PHF3-209ENST00000509330 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
PHF3-209ENST00000509330 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
PHF3-209ENST00000509330 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
PHF3-209ENST00000509330 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
PHF3-209ENST00000509330 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
PHF3-209ENST00000509330 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
PHF3-209ENST00000509330 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
PHF3-209ENST00000509330 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
PHF3-209ENST00000509330 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
PHF3-209ENST00000509330 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
PHF3-209ENST00000509330 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms