RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
COPS4-206ENST00000509093 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
COPS4-206ENST00000509093 MT1EP04732 61 aa3.93□□□□□ -1.78
COPS4-206ENST00000509093 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
COPS4-206ENST00000509093 MT1LQ93083 61 aa3.86□□□□□ -1.79
COPS4-206ENST00000509093 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
COPS4-206ENST00000509093 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
COPS4-206ENST00000509093 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
COPS4-206ENST00000509093 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
COPS4-206ENST00000509093 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
COPS4-206ENST00000509093 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
COPS4-206ENST00000509093 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
COPS4-206ENST00000509093 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
COPS4-206ENST00000509093 KRTAP5-9P26371 169 aa3.74□□□□□ -1.81
COPS4-206ENST00000509093 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
COPS4-206ENST00000509093 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
COPS4-206ENST00000509093 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
COPS4-206ENST00000509093 MT1MQ8N339 61 aa3.7□□□□□ -1.82
COPS4-206ENST00000509093 MT1GP13640 62 aa3.69□□□□□ -1.82
COPS4-206ENST00000509093 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
COPS4-206ENST00000509093 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
COPS4-206ENST00000509093 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
COPS4-206ENST00000509093 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.82
COPS4-206ENST00000509093 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.82
COPS4-206ENST00000509093 SPRR2EP22531 72 aa3.63□□□□□ -1.83
COPS4-206ENST00000509093 SPRR2BP35325 72 aa3.63□□□□□ -1.83
COPS4-206ENST00000509093 SPRR2AP35326 72 aa3.63□□□□□ -1.83
COPS4-206ENST00000509093 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
COPS4-206ENST00000509093 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
COPS4-206ENST00000509093 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
COPS4-206ENST00000509093 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
COPS4-206ENST00000509093 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
COPS4-206ENST00000509093 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
COPS4-206ENST00000509093 SPRR2DP22532 72 aa3.48□□□□□ -1.85
COPS4-206ENST00000509093 NEBP20929 6669 aa3.43□□□□□ -1.86
COPS4-206ENST00000509093 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
COPS4-206ENST00000509093 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
COPS4-206ENST00000509093 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
COPS4-206ENST00000509093 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
COPS4-206ENST00000509093 MT1AP04731 61 aa3.27□□□□□ -1.89
COPS4-206ENST00000509093 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
COPS4-206ENST00000509093 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
COPS4-206ENST00000509093 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
COPS4-206ENST00000509093 PRM1P04553 51 aa3.19□□□□□ -1.9
COPS4-206ENST00000509093 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
COPS4-206ENST00000509093 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
COPS4-206ENST00000509093 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
COPS4-206ENST00000509093 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
COPS4-206ENST00000509093 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
COPS4-206ENST00000509093 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
COPS4-206ENST00000509093 MT4P47944 62 aa3.07□□□□□ -1.92
COPS4-206ENST00000509093 MT3P25713 68 aa3.02□□□□□ -1.93
COPS4-206ENST00000509093 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
COPS4-206ENST00000509093 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
COPS4-206ENST00000509093 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
COPS4-206ENST00000509093 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
COPS4-206ENST00000509093 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
COPS4-206ENST00000509093 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
COPS4-206ENST00000509093 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
COPS4-206ENST00000509093 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
COPS4-206ENST00000509093 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
COPS4-206ENST00000509093 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
COPS4-206ENST00000509093 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
COPS4-206ENST00000509093 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
COPS4-206ENST00000509093 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
COPS4-206ENST00000509093 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
COPS4-206ENST00000509093 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
COPS4-206ENST00000509093 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
COPS4-206ENST00000509093 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
COPS4-206ENST00000509093 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
COPS4-206ENST00000509093 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
COPS4-206ENST00000509093 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
COPS4-206ENST00000509093 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
COPS4-206ENST00000509093 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
COPS4-206ENST00000509093 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
COPS4-206ENST00000509093 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
COPS4-206ENST00000509093 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 101 ms