RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
SMG7-214ENST00000508461 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.72
SMG7-214ENST00000508461 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
SMG7-214ENST00000508461 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
SMG7-214ENST00000508461 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
SMG7-214ENST00000508461 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
SMG7-214ENST00000508461 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
SMG7-214ENST00000508461 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
SMG7-214ENST00000508461 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
SMG7-214ENST00000508461 MT1MQ8N339 61 aa4.14□□□□□ -1.75
SMG7-214ENST00000508461 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
SMG7-214ENST00000508461 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
SMG7-214ENST00000508461 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
SMG7-214ENST00000508461 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
SMG7-214ENST00000508461 KRTAP12-4P60329 112 aa4.09□□□□□ -1.76
SMG7-214ENST00000508461 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
SMG7-214ENST00000508461 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
SMG7-214ENST00000508461 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
SMG7-214ENST00000508461 SPRR2EP22531 72 aa3.95□□□□□ -1.78
SMG7-214ENST00000508461 SPRR2BP35325 72 aa3.95□□□□□ -1.78
SMG7-214ENST00000508461 SPRR2AP35326 72 aa3.95□□□□□ -1.78
SMG7-214ENST00000508461 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
SMG7-214ENST00000508461 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
SMG7-214ENST00000508461 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
SMG7-214ENST00000508461 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
SMG7-214ENST00000508461 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
SMG7-214ENST00000508461 SPRR2DP22532 72 aa3.76□□□□□ -1.81
SMG7-214ENST00000508461 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
SMG7-214ENST00000508461 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
SMG7-214ENST00000508461 MT1AP04731 61 aa3.69□□□□□ -1.82
SMG7-214ENST00000508461 PRM1P04553 51 aa3.61□□□□□ -1.83
SMG7-214ENST00000508461 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
SMG7-214ENST00000508461 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SMG7-214ENST00000508461 MT3P25713 68 aa3.48□□□□□ -1.85
SMG7-214ENST00000508461 MT4P47944 62 aa3.46□□□□□ -1.86
SMG7-214ENST00000508461 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
SMG7-214ENST00000508461 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
SMG7-214ENST00000508461 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
SMG7-214ENST00000508461 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
SMG7-214ENST00000508461 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
SMG7-214ENST00000508461 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
SMG7-214ENST00000508461 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
SMG7-214ENST00000508461 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
SMG7-214ENST00000508461 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SMG7-214ENST00000508461 NEBP20929 6669 aa3.07□□□□□ -1.92
SMG7-214ENST00000508461 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
SMG7-214ENST00000508461 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
SMG7-214ENST00000508461 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
SMG7-214ENST00000508461 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
SMG7-214ENST00000508461 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
SMG7-214ENST00000508461 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SMG7-214ENST00000508461 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
SMG7-214ENST00000508461 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
SMG7-214ENST00000508461 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
SMG7-214ENST00000508461 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SMG7-214ENST00000508461 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
SMG7-214ENST00000508461 LCE1EQ5T753 118 aa2.54□□□□□ -2
SMG7-214ENST00000508461 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SMG7-214ENST00000508461 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
SMG7-214ENST00000508461 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
SMG7-214ENST00000508461 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
SMG7-214ENST00000508461 LCE1CQ5T751 118 aa2.4□□□□□ -2.02
SMG7-214ENST00000508461 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
SMG7-214ENST00000508461 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
SMG7-214ENST00000508461 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SMG7-214ENST00000508461 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SMG7-214ENST00000508461 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
SMG7-214ENST00000508461 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
SMG7-214ENST00000508461 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
SMG7-214ENST00000508461 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
SMG7-214ENST00000508461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
SMG7-214ENST00000508461 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
SMG7-214ENST00000508461 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
SMG7-214ENST00000508461 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SMG7-214ENST00000508461 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SMG7-214ENST00000508461 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
SMG7-214ENST00000508461 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 59.5 ms