RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 SPRR2BP35325 72 aa7.61□□□□□ -1.19
HOXC9-203ENST00000508190 SPRR2AP35326 72 aa7.61□□□□□ -1.19
HOXC9-203ENST00000508190 KRTAP9-9Q9BYP9 154 aa7.6□□□□□ -1.19
HOXC9-203ENST00000508190 KRTAP9-4Q9BYQ2 154 aa7.6□□□□□ -1.19
HOXC9-203ENST00000508190 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
HOXC9-203ENST00000508190 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
HOXC9-203ENST00000508190 NEBP20929 6669 aa7.56□□□□□ -1.2
HOXC9-203ENST00000508190 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
HOXC9-203ENST00000508190 KTN1-AS1Q86SY8 53 aa7.47□□□□□ -1.21
HOXC9-203ENST00000508190 KRTAP19-3Q7Z4W3 81 aa7.46□□□□□ -1.22
HOXC9-203ENST00000508190 MT1LQ93083 61 aa7.44□□□□□ -1.22
HOXC9-203ENST00000508190 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
HOXC9-203ENST00000508190 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
HOXC9-203ENST00000508190 SPRR2DP22532 72 aa7.34□□□□□ -1.23
HOXC9-203ENST00000508190 MT1GP13640 62 aa7.33□□□□□ -1.24
HOXC9-203ENST00000508190 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
HOXC9-203ENST00000508190 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
HOXC9-203ENST00000508190 MT1MQ8N339 61 aa7.26□□□□□ -1.25
HOXC9-203ENST00000508190 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
HOXC9-203ENST00000508190 KRTAP20-1Q3LI63 56 aa7.12□□□□□ -1.27
HOXC9-203ENST00000508190 KRTAP4-3Q9BYR4 195 aa7.12□□□□□ -1.27
HOXC9-203ENST00000508190 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.27
HOXC9-203ENST00000508190 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.27
HOXC9-203ENST00000508190 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
HOXC9-203ENST00000508190 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
HOXC9-203ENST00000508190 LCE3CQ5T5A8 94 aa7.06□□□□□ -1.28
HOXC9-203ENST00000508190 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
HOXC9-203ENST00000508190 DSTQ03001 7570 aaKnown RBP6.97□□□□□ -1.29
HOXC9-203ENST00000508190 KRTAP2-2Q9BYT5 123 aa6.91□□□□□ -1.3
HOXC9-203ENST00000508190 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
HOXC9-203ENST00000508190 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
HOXC9-203ENST00000508190 LCE4AQ5TA78 99 aa6.72□□□□□ -1.33
HOXC9-203ENST00000508190 KRTAP9-6A8MVA2 160 aa6.69□□□□□ -1.34
HOXC9-203ENST00000508190 KRTAP5-5Q701N2 237 aaPredicted RBP6.59□□□□□ -1.35
HOXC9-203ENST00000508190 H3BS24 57 aa6.54□□□□□ -1.36
HOXC9-203ENST00000508190 SPRR5A0A1B0GTR4 108 aa6.52□□□□□ -1.37
HOXC9-203ENST00000508190 KRTAP5-4Q6L8H1 288 aa6.51□□□□□ -1.37
HOXC9-203ENST00000508190 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.39
HOXC9-203ENST00000508190 MT4P47944 62 aa6.39□□□□□ -1.39
HOXC9-203ENST00000508190 MT1AP04731 61 aa6.32□□□□□ -1.4
HOXC9-203ENST00000508190 KRTAP6-1Q3LI64 71 aa6.29□□□□□ -1.4
HOXC9-203ENST00000508190 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
HOXC9-203ENST00000508190 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
HOXC9-203ENST00000508190 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
HOXC9-203ENST00000508190 KRTAP20-2Q3LI61 65 aa6.12□□□□□ -1.43
HOXC9-203ENST00000508190 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
HOXC9-203ENST00000508190 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
HOXC9-203ENST00000508190 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
HOXC9-203ENST00000508190 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
HOXC9-203ENST00000508190 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
HOXC9-203ENST00000508190 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
HOXC9-203ENST00000508190 MT3P25713 68 aa5.74□□□□□ -1.49
HOXC9-203ENST00000508190 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
HOXC9-203ENST00000508190 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
HOXC9-203ENST00000508190 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
HOXC9-203ENST00000508190 KRTAP5-8O75690 187 aa5.23□□□□□ -1.57
HOXC9-203ENST00000508190 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
HOXC9-203ENST00000508190 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.58
HOXC9-203ENST00000508190 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
HOXC9-203ENST00000508190 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
HOXC9-203ENST00000508190 INE1O15225 51 aa5.06□□□□□ -1.6
HOXC9-203ENST00000508190 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
HOXC9-203ENST00000508190 MUC5ACP98088 5654 aa4.9□□□□□ -1.62
HOXC9-203ENST00000508190 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
HOXC9-203ENST00000508190 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
HOXC9-203ENST00000508190 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
HOXC9-203ENST00000508190 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
HOXC9-203ENST00000508190 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
HOXC9-203ENST00000508190 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
HOXC9-203ENST00000508190 PRM1P04553 51 aa4.16□□□□□ -1.74
HOXC9-203ENST00000508190 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
HOXC9-203ENST00000508190 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
HOXC9-203ENST00000508190 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
HOXC9-203ENST00000508190 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
HOXC9-203ENST00000508190 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
HOXC9-203ENST00000508190 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
HOXC9-203ENST00000508190 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms