RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.23
SPCS3-203ENST00000507678 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.24
SPCS3-203ENST00000507678 KRTAP19-4Q3LI73 84 aa7.34□□□□□ -1.24
SPCS3-203ENST00000507678 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.25
SPCS3-203ENST00000507678 MT1GP13640 62 aa7.26□□□□□ -1.25
SPCS3-203ENST00000507678 KRTAP2-3P0C7H8 128 aa7.25□□□□□ -1.25
SPCS3-203ENST00000507678 KRTAP19-3Q7Z4W3 81 aa7.25□□□□□ -1.25
SPCS3-203ENST00000507678 KRTAP2-4Q9BYR9 128 aa7.25□□□□□ -1.25
SPCS3-203ENST00000507678 KRTAP2-1Q9BYU5 128 aa7.25□□□□□ -1.25
SPCS3-203ENST00000507678 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
SPCS3-203ENST00000507678 MT1MQ8N339 61 aa7.22□□□□□ -1.25
SPCS3-203ENST00000507678 SPRR2FQ96RM1 72 aa7.22□□□□□ -1.25
SPCS3-203ENST00000507678 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.26
SPCS3-203ENST00000507678 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
SPCS3-203ENST00000507678 LCE5AQ5TCM9 118 aa7□□□□□ -1.29
SPCS3-203ENST00000507678 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
SPCS3-203ENST00000507678 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
SPCS3-203ENST00000507678 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
SPCS3-203ENST00000507678 KRTAP12-4P60329 112 aa6.68□□□□□ -1.34
SPCS3-203ENST00000507678 LCE1AQ5T7P2 110 aa6.66□□□□□ -1.34
SPCS3-203ENST00000507678 SYNE1Q8NF91 8797 aaKnown RBP6.65□□□□□ -1.34
SPCS3-203ENST00000507678 SPRR2EP22531 72 aa6.6□□□□□ -1.35
SPCS3-203ENST00000507678 SPRR2BP35325 72 aa6.6□□□□□ -1.35
SPCS3-203ENST00000507678 SPRR2AP35326 72 aa6.6□□□□□ -1.35
SPCS3-203ENST00000507678 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
SPCS3-203ENST00000507678 KRTAP6-1Q3LI64 71 aa6.56□□□□□ -1.36
SPCS3-203ENST00000507678 KRTAP4-9Q9BYQ8 210 aa6.54□□□□□ -1.36
SPCS3-203ENST00000507678 MT1AP04731 61 aa6.41□□□□□ -1.38
SPCS3-203ENST00000507678 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
SPCS3-203ENST00000507678 SPRR2DP22532 72 aa6.31□□□□□ -1.4
SPCS3-203ENST00000507678 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
SPCS3-203ENST00000507678 OBSCNQ5VST9 7968 aa6.17□□□□□ -1.42
SPCS3-203ENST00000507678 LCE3DQ9BYE3 92 aa6.15□□□□□ -1.42
SPCS3-203ENST00000507678 KRTAP6-3Q3LI67 103 aa6.13□□□□□ -1.43
SPCS3-203ENST00000507678 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
SPCS3-203ENST00000507678 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
SPCS3-203ENST00000507678 LCE3EQ5T5B0 92 aa6.02□□□□□ -1.44
SPCS3-203ENST00000507678 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
SPCS3-203ENST00000507678 PRM1P04553 51 aa6.01□□□□□ -1.45
SPCS3-203ENST00000507678 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
SPCS3-203ENST00000507678 MT3P25713 68 aa5.79□□□□□ -1.48
SPCS3-203ENST00000507678 NEBP20929 6669 aa5.72□□□□□ -1.49
SPCS3-203ENST00000507678 MT4P47944 62 aa5.65□□□□□ -1.5
SPCS3-203ENST00000507678 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
SPCS3-203ENST00000507678 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
SPCS3-203ENST00000507678 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
SPCS3-203ENST00000507678 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
SPCS3-203ENST00000507678 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
SPCS3-203ENST00000507678 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
SPCS3-203ENST00000507678 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
SPCS3-203ENST00000507678 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
SPCS3-203ENST00000507678 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
SPCS3-203ENST00000507678 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.6
SPCS3-203ENST00000507678 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
SPCS3-203ENST00000507678 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
SPCS3-203ENST00000507678 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
SPCS3-203ENST00000507678 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
SPCS3-203ENST00000507678 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
SPCS3-203ENST00000507678 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SPCS3-203ENST00000507678 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
SPCS3-203ENST00000507678 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
SPCS3-203ENST00000507678 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
SPCS3-203ENST00000507678 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
SPCS3-203ENST00000507678 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
SPCS3-203ENST00000507678 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
SPCS3-203ENST00000507678 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
SPCS3-203ENST00000507678 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
SPCS3-203ENST00000507678 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
SPCS3-203ENST00000507678 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
SPCS3-203ENST00000507678 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
SPCS3-203ENST00000507678 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
SPCS3-203ENST00000507678 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
SPCS3-203ENST00000507678 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.8
SPCS3-203ENST00000507678 KRTAP21-1Q3LI58 79 aa3.77□□□□□ -1.81
SPCS3-203ENST00000507678 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
SPCS3-203ENST00000507678 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
SPCS3-203ENST00000507678 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
SPCS3-203ENST00000507678 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms