RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 SPINK1P00995 79 aa0.67□□□□□ -2.3
SRPK1-208ENST00000507292 COX6B2Q6YFQ2 88 aa0.67□□□□□ -2.3
SRPK1-208ENST00000507292 UBE2DNLQ8IWF7 75 aa0.67□□□□□ -2.3
SRPK1-208ENST00000507292 BIRC6Q9NR09 4857 aa0.67□□□□□ -2.3
SRPK1-208ENST00000507292 LRP2P98164 4655 aa0.67□□□□□ -2.3
SRPK1-208ENST00000507292 KRTAP5-10Q6L8G5 202 aa0.66□□□□□ -2.3
SRPK1-208ENST00000507292 KIAA1109Q2LD37 5005 aa0.65□□□□□ -2.31
SRPK1-208ENST00000507292 RPL37P61927 97 aaKnown RBP0.65□□□□□ -2.31
SRPK1-208ENST00000507292 PCLOQ9Y6V0 5065 aa0.65□□□□□ -2.31
SRPK1-208ENST00000507292 C10orf95Q9H7T3 257 aa0.64□□□□□ -2.31
SRPK1-208ENST00000507292 S4R3F8 94 aa0.64□□□□□ -2.31
SRPK1-208ENST00000507292 HERC2O95714 4834 aa0.64□□□□□ -2.31
SRPK1-208ENST00000507292 EPPK1P58107 5090 aaKnown RBP0.64□□□□□ -2.31
SRPK1-208ENST00000507292 HMCN2Q8NDA2 5059 aa0.63□□□□□ -2.31
SRPK1-208ENST00000507292 CRIPTQ9P021 101 aa0.63□□□□□ -2.31
SRPK1-208ENST00000507292 UBR4Q5T4S7 5183 aa0.62□□□□□ -2.31
SRPK1-208ENST00000507292 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
SRPK1-208ENST00000507292 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
SRPK1-208ENST00000507292 M0QZ58 72 aa0.61□□□□□ -2.31
SRPK1-208ENST00000507292 A0A0D9SG42 100 aa0.6□□□□□ -2.31
SRPK1-208ENST00000507292 KRTAP19-2Q3LHN2 52 aa0.6□□□□□ -2.31
SRPK1-208ENST00000507292 DMBT1Q9UGM3 2413 aaPredicted RBP0.6□□□□□ -2.31
SRPK1-208ENST00000507292 MT1HL1P0DM35 61 aa0.59□□□□□ -2.31
SRPK1-208ENST00000507292 PLAC4Q8WY50 150 aa0.59□□□□□ -2.31
SRPK1-208ENST00000507292 MUC2Q02817 5179 aa0.58□□□□□ -2.32
SRPK1-208ENST00000507292 FAT4Q6V0I7 4981 aa0.57□□□□□ -2.32
SRPK1-208ENST00000507292 SMR3BP02814 79 aaPredicted RBP0.56□□□□□ -2.32
SRPK1-208ENST00000507292 Q5VSD8 79 aa0.55□□□□□ -2.32
SRPK1-208ENST00000507292 SPRR2GQ9BYE4 73 aa0.54□□□□□ -2.32
SRPK1-208ENST00000507292 TNP1P09430 55 aa0.53□□□□□ -2.32
SRPK1-208ENST00000507292 KRTAP8-1Q8IUC2 63 aa0.53□□□□□ -2.32
SRPK1-208ENST00000507292 USH2AO75445 5202 aa0.53□□□□□ -2.33
SRPK1-208ENST00000507292 KRTAP19-8Q3LI54 63 aa0.52□□□□□ -2.33
SRPK1-208ENST00000507292 SSPOA2VEC9 5147 aa0.52□□□□□ -2.33
SRPK1-208ENST00000507292 KMT2DO14686 5537 aa0.5□□□□□ -2.33
SRPK1-208ENST00000507292 MT1BP07438 61 aa0.5□□□□□ -2.33
SRPK1-208ENST00000507292 MT1XP80297 61 aa0.5□□□□□ -2.33
SRPK1-208ENST00000507292 MT2AP02795 61 aa0.49□□□□□ -2.33
SRPK1-208ENST00000507292 MT1FP04733 61 aa0.49□□□□□ -2.33
SRPK1-208ENST00000507292 KRTAP2-3P0C7H8 128 aa0.49□□□□□ -2.33
SRPK1-208ENST00000507292 KRTAP2-4Q9BYR9 128 aa0.49□□□□□ -2.33
SRPK1-208ENST00000507292 KRTAP2-1Q9BYU5 128 aa0.49□□□□□ -2.33
SRPK1-208ENST00000507292 MT1HP80294 61 aa0.48□□□□□ -2.33
SRPK1-208ENST00000507292 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
SRPK1-208ENST00000507292 MUC12Q9UKN1 5478 aa0.47□□□□□ -2.33
SRPK1-208ENST00000507292 KRTAP19-7Q3SYF9 63 aa0.45□□□□□ -2.34
SRPK1-208ENST00000507292 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
SRPK1-208ENST00000507292 MT1EP04732 61 aa0.43□□□□□ -2.34
SRPK1-208ENST00000507292 MT1LQ93083 61 aa0.43□□□□□ -2.34
SRPK1-208ENST00000507292 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
SRPK1-208ENST00000507292 AHNAKQ09666 5890 aaKnown RBP0.41□□□□□ -2.34
SRPK1-208ENST00000507292 M0R2T5 61 aa0.4□□□□□ -2.35
SRPK1-208ENST00000507292 MT1MQ8N339 61 aa0.4□□□□□ -2.35
SRPK1-208ENST00000507292 MUC5BQ9HC84 5762 aaPredicted RBP0.39□□□□□ -2.35
SRPK1-208ENST00000507292 MT1AP04731 61 aa0.39□□□□□ -2.35
SRPK1-208ENST00000507292 KRTAP19-6Q3LI70 58 aa0.39□□□□□ -2.35
SRPK1-208ENST00000507292 MUC5ACP98088 5654 aa0.37□□□□□ -2.35
SRPK1-208ENST00000507292 MT1GP13640 62 aa0.37□□□□□ -2.35
SRPK1-208ENST00000507292 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
SRPK1-208ENST00000507292 GPR98Q8WXG9 6306 aa0.36□□□□□ -2.35
SRPK1-208ENST00000507292 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
SRPK1-208ENST00000507292 PRM1P04553 51 aa0.36□□□□□ -2.35
SRPK1-208ENST00000507292 KRTAP6-1Q3LI64 71 aa0.36□□□□□ -2.35
SRPK1-208ENST00000507292 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
SRPK1-208ENST00000507292 DSTQ03001 7570 aaKnown RBP0.36□□□□□ -2.35
SRPK1-208ENST00000507292 KRTAP6-2Q3LI66 62 aa0.35□□□□□ -2.35
SRPK1-208ENST00000507292 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
SRPK1-208ENST00000507292 MACF1Q9UPN3 7388 aaKnown RBP0.35□□□□□ -2.35
SRPK1-208ENST00000507292 SPRR2EP22531 72 aa0.33□□□□□ -2.36
SRPK1-208ENST00000507292 SPRR2AP35326 72 aa0.33□□□□□ -2.36
SRPK1-208ENST00000507292 SPRR2BP35325 72 aa0.32□□□□□ -2.36
SRPK1-208ENST00000507292 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
SRPK1-208ENST00000507292 SPRR2DP22532 72 aa0.3□□□□□ -2.36
SRPK1-208ENST00000507292 NEBP20929 6669 aa0.29□□□□□ -2.36
SRPK1-208ENST00000507292 KRTAP20-2Q3LI61 65 aa0.27□□□□□ -2.37
SRPK1-208ENST00000507292 PHGR1C9JFL3 82 aa0.25□□□□□ -2.37
SRPK1-208ENST00000507292 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
SRPK1-208ENST00000507292 MT4P47944 62 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms