RNA–Protein interactions for RNA: ENST00000505699.5

ABCC3-207, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 2

Gene ABCC3, Length 5,271 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-207ENST00000505699 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
ABCC3-207ENST00000505699 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
ABCC3-207ENST00000505699 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
ABCC3-207ENST00000505699 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
ABCC3-207ENST00000505699 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
ABCC3-207ENST00000505699 MT1LQ93083 61 aa3.92□□□□□ -1.78
ABCC3-207ENST00000505699 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.78
ABCC3-207ENST00000505699 MT1EP04732 61 aa3.88□□□□□ -1.79
ABCC3-207ENST00000505699 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
ABCC3-207ENST00000505699 MT3P25713 68 aa3.83□□□□□ -1.8
ABCC3-207ENST00000505699 MT4P47944 62 aa3.78□□□□□ -1.8
ABCC3-207ENST00000505699 MT1MQ8N339 61 aa3.78□□□□□ -1.8
ABCC3-207ENST00000505699 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
ABCC3-207ENST00000505699 USH2AO75445 5202 aa3.7□□□□□ -1.82
ABCC3-207ENST00000505699 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
ABCC3-207ENST00000505699 PRM1P04553 51 aa3.69□□□□□ -1.82
ABCC3-207ENST00000505699 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
ABCC3-207ENST00000505699 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
ABCC3-207ENST00000505699 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.82
ABCC3-207ENST00000505699 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
ABCC3-207ENST00000505699 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
ABCC3-207ENST00000505699 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
ABCC3-207ENST00000505699 MT1AP04731 61 aa3.54□□□□□ -1.84
ABCC3-207ENST00000505699 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
ABCC3-207ENST00000505699 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
ABCC3-207ENST00000505699 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
ABCC3-207ENST00000505699 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
ABCC3-207ENST00000505699 KMT2DO14686 5537 aa3.48□□□□□ -1.85
ABCC3-207ENST00000505699 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.85
ABCC3-207ENST00000505699 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
ABCC3-207ENST00000505699 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
ABCC3-207ENST00000505699 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
ABCC3-207ENST00000505699 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
ABCC3-207ENST00000505699 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
ABCC3-207ENST00000505699 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
ABCC3-207ENST00000505699 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
ABCC3-207ENST00000505699 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
ABCC3-207ENST00000505699 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.88
ABCC3-207ENST00000505699 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
ABCC3-207ENST00000505699 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
ABCC3-207ENST00000505699 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
ABCC3-207ENST00000505699 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
ABCC3-207ENST00000505699 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
ABCC3-207ENST00000505699 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
ABCC3-207ENST00000505699 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
ABCC3-207ENST00000505699 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
ABCC3-207ENST00000505699 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
ABCC3-207ENST00000505699 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ABCC3-207ENST00000505699 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
ABCC3-207ENST00000505699 NEBP20929 6669 aa2.96□□□□□ -1.94
ABCC3-207ENST00000505699 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
ABCC3-207ENST00000505699 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
ABCC3-207ENST00000505699 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
ABCC3-207ENST00000505699 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
ABCC3-207ENST00000505699 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
ABCC3-207ENST00000505699 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
ABCC3-207ENST00000505699 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
ABCC3-207ENST00000505699 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
ABCC3-207ENST00000505699 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
ABCC3-207ENST00000505699 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
ABCC3-207ENST00000505699 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
ABCC3-207ENST00000505699 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
ABCC3-207ENST00000505699 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
ABCC3-207ENST00000505699 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
ABCC3-207ENST00000505699 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
ABCC3-207ENST00000505699 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
ABCC3-207ENST00000505699 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
ABCC3-207ENST00000505699 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
ABCC3-207ENST00000505699 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
ABCC3-207ENST00000505699 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
ABCC3-207ENST00000505699 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
ABCC3-207ENST00000505699 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
ABCC3-207ENST00000505699 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
ABCC3-207ENST00000505699 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
ABCC3-207ENST00000505699 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
ABCC3-207ENST00000505699 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
ABCC3-207ENST00000505699 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
ABCC3-207ENST00000505699 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms