RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
TCOF1-207ENST00000504761 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
TCOF1-207ENST00000504761 SPRR2DP22532 72 aa4.71□□□□□ -1.66
TCOF1-207ENST00000504761 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
TCOF1-207ENST00000504761 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
TCOF1-207ENST00000504761 KMT2DO14686 5537 aa4.7□□□□□ -1.66
TCOF1-207ENST00000504761 LCE2DQ5TA82 110 aaPredicted RBP4.69□□□□□ -1.66
TCOF1-207ENST00000504761 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
TCOF1-207ENST00000504761 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
TCOF1-207ENST00000504761 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
TCOF1-207ENST00000504761 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
TCOF1-207ENST00000504761 MT1MQ8N339 61 aa4.59□□□□□ -1.67
TCOF1-207ENST00000504761 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.68
TCOF1-207ENST00000504761 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
TCOF1-207ENST00000504761 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
TCOF1-207ENST00000504761 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.69
TCOF1-207ENST00000504761 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
TCOF1-207ENST00000504761 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
TCOF1-207ENST00000504761 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
TCOF1-207ENST00000504761 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
TCOF1-207ENST00000504761 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
TCOF1-207ENST00000504761 MT4P47944 62 aa4.28□□□□□ -1.72
TCOF1-207ENST00000504761 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
TCOF1-207ENST00000504761 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
TCOF1-207ENST00000504761 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
TCOF1-207ENST00000504761 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
TCOF1-207ENST00000504761 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
TCOF1-207ENST00000504761 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
TCOF1-207ENST00000504761 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
TCOF1-207ENST00000504761 MT1AP04731 61 aa4.13□□□□□ -1.75
TCOF1-207ENST00000504761 MT3P25713 68 aa4.11□□□□□ -1.75
TCOF1-207ENST00000504761 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
TCOF1-207ENST00000504761 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
TCOF1-207ENST00000504761 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
TCOF1-207ENST00000504761 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
TCOF1-207ENST00000504761 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
TCOF1-207ENST00000504761 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
TCOF1-207ENST00000504761 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
TCOF1-207ENST00000504761 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
TCOF1-207ENST00000504761 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
TCOF1-207ENST00000504761 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
TCOF1-207ENST00000504761 PRM1P04553 51 aa3.84□□□□□ -1.8
TCOF1-207ENST00000504761 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
TCOF1-207ENST00000504761 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
TCOF1-207ENST00000504761 NEBP20929 6669 aa3.78□□□□□ -1.8
TCOF1-207ENST00000504761 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
TCOF1-207ENST00000504761 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
TCOF1-207ENST00000504761 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
TCOF1-207ENST00000504761 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
TCOF1-207ENST00000504761 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
TCOF1-207ENST00000504761 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
TCOF1-207ENST00000504761 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
TCOF1-207ENST00000504761 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
TCOF1-207ENST00000504761 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
TCOF1-207ENST00000504761 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
TCOF1-207ENST00000504761 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
TCOF1-207ENST00000504761 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
TCOF1-207ENST00000504761 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
TCOF1-207ENST00000504761 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
TCOF1-207ENST00000504761 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
TCOF1-207ENST00000504761 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
TCOF1-207ENST00000504761 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
TCOF1-207ENST00000504761 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
TCOF1-207ENST00000504761 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
TCOF1-207ENST00000504761 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
TCOF1-207ENST00000504761 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
TCOF1-207ENST00000504761 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
TCOF1-207ENST00000504761 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
TCOF1-207ENST00000504761 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
TCOF1-207ENST00000504761 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
TCOF1-207ENST00000504761 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
TCOF1-207ENST00000504761 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TCOF1-207ENST00000504761 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
TCOF1-207ENST00000504761 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
TCOF1-207ENST00000504761 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
TCOF1-207ENST00000504761 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
TCOF1-207ENST00000504761 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 65.2 ms