RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 SPRR2EP22531 72 aa4.07□□□□□ -1.76
TRIO-206ENST00000504606 SPRR2BP35325 72 aa4.07□□□□□ -1.76
TRIO-206ENST00000504606 SPRR2AP35326 72 aa4.07□□□□□ -1.76
TRIO-206ENST00000504606 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
TRIO-206ENST00000504606 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
TRIO-206ENST00000504606 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
TRIO-206ENST00000504606 MT1LQ93083 61 aa4.05□□□□□ -1.76
TRIO-206ENST00000504606 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
TRIO-206ENST00000504606 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
TRIO-206ENST00000504606 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
TRIO-206ENST00000504606 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
TRIO-206ENST00000504606 MT1GP13640 62 aa3.99□□□□□ -1.77
TRIO-206ENST00000504606 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
TRIO-206ENST00000504606 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
TRIO-206ENST00000504606 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
TRIO-206ENST00000504606 MT1MQ8N339 61 aa3.94□□□□□ -1.78
TRIO-206ENST00000504606 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
TRIO-206ENST00000504606 SPRR2DP22532 72 aa3.92□□□□□ -1.78
TRIO-206ENST00000504606 NEBP20929 6669 aa3.92□□□□□ -1.78
TRIO-206ENST00000504606 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
TRIO-206ENST00000504606 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
TRIO-206ENST00000504606 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
TRIO-206ENST00000504606 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
TRIO-206ENST00000504606 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
TRIO-206ENST00000504606 H3BS24 57 aa3.79□□□□□ -1.8
TRIO-206ENST00000504606 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
TRIO-206ENST00000504606 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
TRIO-206ENST00000504606 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
TRIO-206ENST00000504606 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
TRIO-206ENST00000504606 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
TRIO-206ENST00000504606 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
TRIO-206ENST00000504606 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
TRIO-206ENST00000504606 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
TRIO-206ENST00000504606 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
TRIO-206ENST00000504606 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
TRIO-206ENST00000504606 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
TRIO-206ENST00000504606 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
TRIO-206ENST00000504606 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
TRIO-206ENST00000504606 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
TRIO-206ENST00000504606 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
TRIO-206ENST00000504606 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
TRIO-206ENST00000504606 MT1AP04731 61 aa3.46□□□□□ -1.86
TRIO-206ENST00000504606 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
TRIO-206ENST00000504606 MT4P47944 62 aa3.41□□□□□ -1.86
TRIO-206ENST00000504606 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
TRIO-206ENST00000504606 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
TRIO-206ENST00000504606 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
TRIO-206ENST00000504606 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
TRIO-206ENST00000504606 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
TRIO-206ENST00000504606 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
TRIO-206ENST00000504606 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
TRIO-206ENST00000504606 MT3P25713 68 aa3.14□□□□□ -1.91
TRIO-206ENST00000504606 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
TRIO-206ENST00000504606 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
TRIO-206ENST00000504606 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
TRIO-206ENST00000504606 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
TRIO-206ENST00000504606 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
TRIO-206ENST00000504606 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
TRIO-206ENST00000504606 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
TRIO-206ENST00000504606 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
TRIO-206ENST00000504606 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
TRIO-206ENST00000504606 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
TRIO-206ENST00000504606 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
TRIO-206ENST00000504606 INE1O15225 51 aa2.69□□□□□ -1.98
TRIO-206ENST00000504606 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
TRIO-206ENST00000504606 LCE1CQ5T751 118 aa2.56□□□□□ -2
TRIO-206ENST00000504606 MUC5ACP98088 5654 aa2.53□□□□□ -2.01
TRIO-206ENST00000504606 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
TRIO-206ENST00000504606 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
TRIO-206ENST00000504606 PRM1P04553 51 aa2.37□□□□□ -2.03
TRIO-206ENST00000504606 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
TRIO-206ENST00000504606 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
TRIO-206ENST00000504606 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
TRIO-206ENST00000504606 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
TRIO-206ENST00000504606 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
TRIO-206ENST00000504606 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
TRIO-206ENST00000504606 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
TRIO-206ENST00000504606 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 65.7 ms