RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
PDGFC-203ENST00000502773 MT1EP04732 61 aa2.58□□□□□ -2
PDGFC-203ENST00000502773 MT1GP13640 62 aa2.57□□□□□ -2
PDGFC-203ENST00000502773 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
PDGFC-203ENST00000502773 MT1LQ93083 61 aa2.57□□□□□ -2
PDGFC-203ENST00000502773 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
PDGFC-203ENST00000502773 KRTAP4-8A0A0G2JLE6 195 aa2.56□□□□□ -2
PDGFC-203ENST00000502773 FSIP2Q5CZC0 6907 aa2.55□□□□□ -2
PDGFC-203ENST00000502773 LCE1DQ5T752 114 aa2.54□□□□□ -2
PDGFC-203ENST00000502773 KRTAP12-4P60329 112 aa2.53□□□□□ -2
PDGFC-203ENST00000502773 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
PDGFC-203ENST00000502773 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
PDGFC-203ENST00000502773 KRTAP4-7Q9BYR0 210 aa2.47□□□□□ -2.01
PDGFC-203ENST00000502773 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
PDGFC-203ENST00000502773 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
PDGFC-203ENST00000502773 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
PDGFC-203ENST00000502773 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
PDGFC-203ENST00000502773 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
PDGFC-203ENST00000502773 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
PDGFC-203ENST00000502773 MT1MQ8N339 61 aa2.43□□□□□ -2.02
PDGFC-203ENST00000502773 USH2AO75445 5202 aa2.42□□□□□ -2.02
PDGFC-203ENST00000502773 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
PDGFC-203ENST00000502773 KMT2DO14686 5537 aa2.39□□□□□ -2.03
PDGFC-203ENST00000502773 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
PDGFC-203ENST00000502773 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
PDGFC-203ENST00000502773 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
PDGFC-203ENST00000502773 SPRR2EP22531 72 aa2.29□□□□□ -2.04
PDGFC-203ENST00000502773 SPRR2BP35325 72 aa2.29□□□□□ -2.04
PDGFC-203ENST00000502773 SPRR2AP35326 72 aa2.29□□□□□ -2.04
PDGFC-203ENST00000502773 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
PDGFC-203ENST00000502773 PRM1P04553 51 aa2.26□□□□□ -2.05
PDGFC-203ENST00000502773 MT1AP04731 61 aa2.26□□□□□ -2.05
PDGFC-203ENST00000502773 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
PDGFC-203ENST00000502773 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
PDGFC-203ENST00000502773 SPRR2DP22532 72 aa2.22□□□□□ -2.05
PDGFC-203ENST00000502773 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.05
PDGFC-203ENST00000502773 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
PDGFC-203ENST00000502773 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
PDGFC-203ENST00000502773 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
PDGFC-203ENST00000502773 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
PDGFC-203ENST00000502773 MT3P25713 68 aa2.13□□□□□ -2.07
PDGFC-203ENST00000502773 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
PDGFC-203ENST00000502773 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
PDGFC-203ENST00000502773 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
PDGFC-203ENST00000502773 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
PDGFC-203ENST00000502773 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
PDGFC-203ENST00000502773 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
PDGFC-203ENST00000502773 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
PDGFC-203ENST00000502773 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
PDGFC-203ENST00000502773 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
PDGFC-203ENST00000502773 SYNE2Q8WXH0 6885 aaKnown RBP1.95□□□□□ -2.1
PDGFC-203ENST00000502773 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
PDGFC-203ENST00000502773 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
PDGFC-203ENST00000502773 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
PDGFC-203ENST00000502773 NEBP20929 6669 aa1.86□□□□□ -2.11
PDGFC-203ENST00000502773 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
PDGFC-203ENST00000502773 MT4P47944 62 aa1.83□□□□□ -2.12
PDGFC-203ENST00000502773 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
PDGFC-203ENST00000502773 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
PDGFC-203ENST00000502773 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
PDGFC-203ENST00000502773 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
PDGFC-203ENST00000502773 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
PDGFC-203ENST00000502773 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
PDGFC-203ENST00000502773 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
PDGFC-203ENST00000502773 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
PDGFC-203ENST00000502773 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
PDGFC-203ENST00000502773 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
PDGFC-203ENST00000502773 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
PDGFC-203ENST00000502773 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
PDGFC-203ENST00000502773 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
PDGFC-203ENST00000502773 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
PDGFC-203ENST00000502773 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
PDGFC-203ENST00000502773 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
PDGFC-203ENST00000502773 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
PDGFC-203ENST00000502773 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
PDGFC-203ENST00000502773 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
PDGFC-203ENST00000502773 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 98.2 ms