RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
VCAN-204ENST00000502527 INE1O15225 51 aa5.81□□□□□ -1.48
VCAN-204ENST00000502527 MT1EP04732 61 aa5.8□□□□□ -1.48
VCAN-204ENST00000502527 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
VCAN-204ENST00000502527 MT1LQ93083 61 aa5.78□□□□□ -1.48
VCAN-204ENST00000502527 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
VCAN-204ENST00000502527 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
VCAN-204ENST00000502527 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
VCAN-204ENST00000502527 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.52
VCAN-204ENST00000502527 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.52
VCAN-204ENST00000502527 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.52
VCAN-204ENST00000502527 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.52
VCAN-204ENST00000502527 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
VCAN-204ENST00000502527 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
VCAN-204ENST00000502527 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
VCAN-204ENST00000502527 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
VCAN-204ENST00000502527 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.53
VCAN-204ENST00000502527 MT1GP13640 62 aa5.45□□□□□ -1.54
VCAN-204ENST00000502527 MT1MQ8N339 61 aa5.43□□□□□ -1.54
VCAN-204ENST00000502527 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
VCAN-204ENST00000502527 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
VCAN-204ENST00000502527 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
VCAN-204ENST00000502527 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
VCAN-204ENST00000502527 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
VCAN-204ENST00000502527 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
VCAN-204ENST00000502527 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
VCAN-204ENST00000502527 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
VCAN-204ENST00000502527 MT3P25713 68 aa5.08□□□□□ -1.6
VCAN-204ENST00000502527 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
VCAN-204ENST00000502527 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
VCAN-204ENST00000502527 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
VCAN-204ENST00000502527 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.61
VCAN-204ENST00000502527 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
VCAN-204ENST00000502527 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
VCAN-204ENST00000502527 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
VCAN-204ENST00000502527 MT1AP04731 61 aa4.88□□□□□ -1.63
VCAN-204ENST00000502527 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
VCAN-204ENST00000502527 LCE1FQ5T754 118 aa4.86□□□□□ -1.63
VCAN-204ENST00000502527 SPRR2EP22531 72 aa4.85□□□□□ -1.63
VCAN-204ENST00000502527 SPRR2BP35325 72 aa4.85□□□□□ -1.63
VCAN-204ENST00000502527 SPRR2AP35326 72 aa4.85□□□□□ -1.63
VCAN-204ENST00000502527 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
VCAN-204ENST00000502527 SPRR2DP22532 72 aa4.66□□□□□ -1.66
VCAN-204ENST00000502527 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
VCAN-204ENST00000502527 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
VCAN-204ENST00000502527 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
VCAN-204ENST00000502527 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
VCAN-204ENST00000502527 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
VCAN-204ENST00000502527 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
VCAN-204ENST00000502527 PRM1P04553 51 aa4.3□□□□□ -1.72
VCAN-204ENST00000502527 NEBP20929 6669 aa4.2□□□□□ -1.74
VCAN-204ENST00000502527 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
VCAN-204ENST00000502527 MT4P47944 62 aa4.07□□□□□ -1.76
VCAN-204ENST00000502527 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
VCAN-204ENST00000502527 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
VCAN-204ENST00000502527 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
VCAN-204ENST00000502527 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
VCAN-204ENST00000502527 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
VCAN-204ENST00000502527 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
VCAN-204ENST00000502527 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
VCAN-204ENST00000502527 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
VCAN-204ENST00000502527 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
VCAN-204ENST00000502527 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
VCAN-204ENST00000502527 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
VCAN-204ENST00000502527 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
VCAN-204ENST00000502527 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
VCAN-204ENST00000502527 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
VCAN-204ENST00000502527 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
VCAN-204ENST00000502527 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
VCAN-204ENST00000502527 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
VCAN-204ENST00000502527 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
VCAN-204ENST00000502527 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
VCAN-204ENST00000502527 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
VCAN-204ENST00000502527 PHGR1C9JFL3 82 aa2.54□□□□□ -2
VCAN-204ENST00000502527 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
VCAN-204ENST00000502527 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
VCAN-204ENST00000502527 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 59.4 ms