RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MT2AP02795 61 aa2.36□□□□□ -2.03
SOX2-OT-218ENST00000498731 TNP1P09430 55 aa2.34□□□□□ -2.03
SOX2-OT-218ENST00000498731 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.03
SOX2-OT-218ENST00000498731 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
SOX2-OT-218ENST00000498731 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
SOX2-OT-218ENST00000498731 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
SOX2-OT-218ENST00000498731 KMT2DO14686 5537 aa2.31□□□□□ -2.04
SOX2-OT-218ENST00000498731 SPRR2GQ9BYE4 73 aa2.29□□□□□ -2.04
SOX2-OT-218ENST00000498731 LCE1AQ5T7P2 110 aa2.28□□□□□ -2.05
SOX2-OT-218ENST00000498731 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
SOX2-OT-218ENST00000498731 MT3P25713 68 aa2.25□□□□□ -2.05
SOX2-OT-218ENST00000498731 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
SOX2-OT-218ENST00000498731 MT1BP07438 61 aa2.22□□□□□ -2.05
SOX2-OT-218ENST00000498731 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
SOX2-OT-218ENST00000498731 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
SOX2-OT-218ENST00000498731 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
SOX2-OT-218ENST00000498731 MT1XP80297 61 aa2.18□□□□□ -2.06
SOX2-OT-218ENST00000498731 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
SOX2-OT-218ENST00000498731 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
SOX2-OT-218ENST00000498731 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
SOX2-OT-218ENST00000498731 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
SOX2-OT-218ENST00000498731 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
SOX2-OT-218ENST00000498731 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
SOX2-OT-218ENST00000498731 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
SOX2-OT-218ENST00000498731 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
SOX2-OT-218ENST00000498731 KRTAP19-6Q3LI70 58 aa2.09□□□□□ -2.08
SOX2-OT-218ENST00000498731 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
SOX2-OT-218ENST00000498731 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SOX2-OT-218ENST00000498731 SPRR2FQ96RM1 72 aa2.04□□□□□ -2.08
SOX2-OT-218ENST00000498731 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
SOX2-OT-218ENST00000498731 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
SOX2-OT-218ENST00000498731 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
SOX2-OT-218ENST00000498731 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
SOX2-OT-218ENST00000498731 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
SOX2-OT-218ENST00000498731 NEBP20929 6669 aa2.02□□□□□ -2.09
SOX2-OT-218ENST00000498731 SPRR2EP22531 72 aa1.97□□□□□ -2.09
SOX2-OT-218ENST00000498731 SPRR2BP35325 72 aa1.97□□□□□ -2.09
SOX2-OT-218ENST00000498731 SPRR2AP35326 72 aa1.97□□□□□ -2.09
SOX2-OT-218ENST00000498731 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
SOX2-OT-218ENST00000498731 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
SOX2-OT-218ENST00000498731 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
SOX2-OT-218ENST00000498731 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
SOX2-OT-218ENST00000498731 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
SOX2-OT-218ENST00000498731 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-218ENST00000498731 MT1EP04732 61 aa1.89□□□□□ -2.11
SOX2-OT-218ENST00000498731 SPRR2DP22532 72 aa1.89□□□□□ -2.11
SOX2-OT-218ENST00000498731 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
SOX2-OT-218ENST00000498731 MT1LQ93083 61 aa1.88□□□□□ -2.11
SOX2-OT-218ENST00000498731 MT1GP13640 62 aa1.85□□□□□ -2.11
SOX2-OT-218ENST00000498731 KRTAP5-9P26371 169 aa1.85□□□□□ -2.11
SOX2-OT-218ENST00000498731 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
SOX2-OT-218ENST00000498731 MT1MQ8N339 61 aa1.79□□□□□ -2.12
SOX2-OT-218ENST00000498731 PRM1P04553 51 aa1.79□□□□□ -2.12
SOX2-OT-218ENST00000498731 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
SOX2-OT-218ENST00000498731 MT4P47944 62 aa1.74□□□□□ -2.13
SOX2-OT-218ENST00000498731 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
SOX2-OT-218ENST00000498731 KRTAP5-4Q6L8H1 288 aa1.72□□□□□ -2.13
SOX2-OT-218ENST00000498731 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
SOX2-OT-218ENST00000498731 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
SOX2-OT-218ENST00000498731 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
SOX2-OT-218ENST00000498731 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
SOX2-OT-218ENST00000498731 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
SOX2-OT-218ENST00000498731 MT1AP04731 61 aa1.57□□□□□ -2.16
SOX2-OT-218ENST00000498731 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
SOX2-OT-218ENST00000498731 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
SOX2-OT-218ENST00000498731 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
SOX2-OT-218ENST00000498731 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
SOX2-OT-218ENST00000498731 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
SOX2-OT-218ENST00000498731 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
SOX2-OT-218ENST00000498731 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
SOX2-OT-218ENST00000498731 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
SOX2-OT-218ENST00000498731 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
SOX2-OT-218ENST00000498731 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
SOX2-OT-218ENST00000498731 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
SOX2-OT-218ENST00000498731 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
SOX2-OT-218ENST00000498731 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
SOX2-OT-218ENST00000498731 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 124.7 ms