RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 Q5W150 140 aa2.69□□□□□ -1.98
SPTA1-209ENST00000498708 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
SPTA1-209ENST00000498708 SPRR2EP22531 72 aa2.63□□□□□ -1.99
SPTA1-209ENST00000498708 SPRR2BP35325 72 aa2.63□□□□□ -1.99
SPTA1-209ENST00000498708 SPRR2AP35326 72 aa2.63□□□□□ -1.99
SPTA1-209ENST00000498708 LINC00472Q9H8W2 130 aa2.63□□□□□ -1.99
SPTA1-209ENST00000498708 WFDC13Q8IUB5 93 aa2.62□□□□□ -1.99
SPTA1-209ENST00000498708 A0A1B0GU33 70 aa2.6□□□□□ -1.99
SPTA1-209ENST00000498708 A0A1B0GU69 56 aa2.6□□□□□ -1.99
SPTA1-209ENST00000498708 Q8N9L7 120 aa2.59□□□□□ -1.99
SPTA1-209ENST00000498708 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SPTA1-209ENST00000498708 TP53AIP1Q9HCN2 124 aa2.57□□□□□ -2
SPTA1-209ENST00000498708 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
SPTA1-209ENST00000498708 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
SPTA1-209ENST00000498708 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
SPTA1-209ENST00000498708 ACYP2P14621 99 aa2.54□□□□□ -2
SPTA1-209ENST00000498708 SPRR2DP22532 72 aa2.54□□□□□ -2
SPTA1-209ENST00000498708 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
SPTA1-209ENST00000498708 K7EQZ3 153 aa2.53□□□□□ -2
SPTA1-209ENST00000498708 LCE3AQ5TA76 89 aa2.53□□□□□ -2
SPTA1-209ENST00000498708 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SPTA1-209ENST00000498708 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
SPTA1-209ENST00000498708 MT1BP07438 61 aa2.51□□□□□ -2.01
SPTA1-209ENST00000498708 MRPL34Q9BQ48 92 aaKnown RBP2.51□□□□□ -2.01
SPTA1-209ENST00000498708 MMP24-AS1A0A0U1RRL7 71 aa2.5□□□□□ -2.01
SPTA1-209ENST00000498708 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
SPTA1-209ENST00000498708 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
SPTA1-209ENST00000498708 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
SPTA1-209ENST00000498708 S4R3F8 94 aa2.44□□□□□ -2.02
SPTA1-209ENST00000498708 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
SPTA1-209ENST00000498708 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
SPTA1-209ENST00000498708 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
SPTA1-209ENST00000498708 KRTAP8-1Q8IUC2 63 aa2.4□□□□□ -2.03
SPTA1-209ENST00000498708 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
SPTA1-209ENST00000498708 INE1O15225 51 aa2.38□□□□□ -2.03
SPTA1-209ENST00000498708 R4GN34 69 aa2.37□□□□□ -2.03
SPTA1-209ENST00000498708 H0YAA0 97 aa2.36□□□□□ -2.03
SPTA1-209ENST00000498708 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SPTA1-209ENST00000498708 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
SPTA1-209ENST00000498708 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
SPTA1-209ENST00000498708 CRIPTQ9P021 101 aa2.34□□□□□ -2.03
SPTA1-209ENST00000498708 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
SPTA1-209ENST00000498708 MT1XP80297 61 aa2.29□□□□□ -2.04
SPTA1-209ENST00000498708 MT4P47944 62 aa2.28□□□□□ -2.04
SPTA1-209ENST00000498708 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
SPTA1-209ENST00000498708 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
SPTA1-209ENST00000498708 M0QZ58 72 aa2.22□□□□□ -2.05
SPTA1-209ENST00000498708 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
SPTA1-209ENST00000498708 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
SPTA1-209ENST00000498708 C10orf95Q9H7T3 257 aa2.17□□□□□ -2.06
SPTA1-209ENST00000498708 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
SPTA1-209ENST00000498708 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
SPTA1-209ENST00000498708 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
SPTA1-209ENST00000498708 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
SPTA1-209ENST00000498708 MT1EP04732 61 aa2.04□□□□□ -2.08
SPTA1-209ENST00000498708 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
SPTA1-209ENST00000498708 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
SPTA1-209ENST00000498708 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
SPTA1-209ENST00000498708 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
SPTA1-209ENST00000498708 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
SPTA1-209ENST00000498708 A0A0D9SG42 100 aa1.98□□□□□ -2.09
SPTA1-209ENST00000498708 MT1GP13640 62 aa1.97□□□□□ -2.09
SPTA1-209ENST00000498708 MT1MQ8N339 61 aa1.96□□□□□ -2.1
SPTA1-209ENST00000498708 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
SPTA1-209ENST00000498708 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
SPTA1-209ENST00000498708 MT1LQ93083 61 aa1.93□□□□□ -2.1
SPTA1-209ENST00000498708 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
SPTA1-209ENST00000498708 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
SPTA1-209ENST00000498708 TNP1P09430 55 aa1.82□□□□□ -2.12
SPTA1-209ENST00000498708 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
SPTA1-209ENST00000498708 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
SPTA1-209ENST00000498708 MT1AP04731 61 aa1.64□□□□□ -2.15
SPTA1-209ENST00000498708 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
SPTA1-209ENST00000498708 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
SPTA1-209ENST00000498708 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
SPTA1-209ENST00000498708 PRM1P04553 51 aa1.27□□□□□ -2.21
SPTA1-209ENST00000498708 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
SPTA1-209ENST00000498708 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms