RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
RC3H2-210ENST00000498479 RNF213Q63HN8 5207 aa3.65□□□□□ -1.82
RC3H2-210ENST00000498479 LOC100996750A0A140TA64 210 aa3.64□□□□□ -1.83
RC3H2-210ENST00000498479 UBR4Q5T4S7 5183 aa3.59□□□□□ -1.83
RC3H2-210ENST00000498479 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.84
RC3H2-210ENST00000498479 KRTAP19-6Q3LI70 58 aa3.58□□□□□ -1.84
RC3H2-210ENST00000498479 SPRR2EP22531 72 aa3.58□□□□□ -1.84
RC3H2-210ENST00000498479 SPRR2BP35325 72 aa3.58□□□□□ -1.84
RC3H2-210ENST00000498479 SPRR2AP35326 72 aa3.58□□□□□ -1.84
RC3H2-210ENST00000498479 PRM1P04553 51 aa3.57□□□□□ -1.84
RC3H2-210ENST00000498479 MUC2Q02817 5179 aa3.54□□□□□ -1.84
RC3H2-210ENST00000498479 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
RC3H2-210ENST00000498479 MT1AP04731 61 aa3.46□□□□□ -1.86
RC3H2-210ENST00000498479 SPRR2DP22532 72 aa3.45□□□□□ -1.86
RC3H2-210ENST00000498479 MT3P25713 68 aa3.42□□□□□ -1.86
RC3H2-210ENST00000498479 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
RC3H2-210ENST00000498479 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
RC3H2-210ENST00000498479 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
RC3H2-210ENST00000498479 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
RC3H2-210ENST00000498479 LCE2DQ5TA82 110 aaPredicted RBP3.24□□□□□ -1.89
RC3H2-210ENST00000498479 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
RC3H2-210ENST00000498479 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
RC3H2-210ENST00000498479 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
RC3H2-210ENST00000498479 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
RC3H2-210ENST00000498479 USH2AO75445 5202 aa3.15□□□□□ -1.91
RC3H2-210ENST00000498479 KMT2DO14686 5537 aa3.14□□□□□ -1.91
RC3H2-210ENST00000498479 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
RC3H2-210ENST00000498479 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
RC3H2-210ENST00000498479 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
RC3H2-210ENST00000498479 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
RC3H2-210ENST00000498479 MT4P47944 62 aa3.01□□□□□ -1.93
RC3H2-210ENST00000498479 LCE1DQ5T752 114 aa3□□□□□ -1.93
RC3H2-210ENST00000498479 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
RC3H2-210ENST00000498479 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
RC3H2-210ENST00000498479 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
RC3H2-210ENST00000498479 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
RC3H2-210ENST00000498479 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
RC3H2-210ENST00000498479 KRTAP9-6A0A140TA67 174 aa2.88□□□□□ -1.95
RC3H2-210ENST00000498479 SSPOA2VEC9 5147 aa2.88□□□□□ -1.95
RC3H2-210ENST00000498479 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
RC3H2-210ENST00000498479 MUC12Q9UKN1 5478 aa2.83□□□□□ -1.96
RC3H2-210ENST00000498479 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
RC3H2-210ENST00000498479 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
RC3H2-210ENST00000498479 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
RC3H2-210ENST00000498479 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.62□□□□□ -1.99
RC3H2-210ENST00000498479 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
RC3H2-210ENST00000498479 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
RC3H2-210ENST00000498479 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
RC3H2-210ENST00000498479 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
RC3H2-210ENST00000498479 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
RC3H2-210ENST00000498479 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
RC3H2-210ENST00000498479 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
RC3H2-210ENST00000498479 NEBP20929 6669 aa2.31□□□□□ -2.04
RC3H2-210ENST00000498479 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
RC3H2-210ENST00000498479 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
RC3H2-210ENST00000498479 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
RC3H2-210ENST00000498479 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
RC3H2-210ENST00000498479 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
RC3H2-210ENST00000498479 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
RC3H2-210ENST00000498479 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
RC3H2-210ENST00000498479 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
RC3H2-210ENST00000498479 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
RC3H2-210ENST00000498479 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
RC3H2-210ENST00000498479 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
RC3H2-210ENST00000498479 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
RC3H2-210ENST00000498479 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
RC3H2-210ENST00000498479 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
RC3H2-210ENST00000498479 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
RC3H2-210ENST00000498479 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
RC3H2-210ENST00000498479 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
RC3H2-210ENST00000498479 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
RC3H2-210ENST00000498479 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
RC3H2-210ENST00000498479 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
RC3H2-210ENST00000498479 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
RC3H2-210ENST00000498479 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
RC3H2-210ENST00000498479 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
RC3H2-210ENST00000498479 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
RC3H2-210ENST00000498479 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms