RNA–Protein interactions for RNA: ENST00000498374.1

ATXN1-210, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-210ENST00000498374 RNF213Q63HN8 5207 aa3.15□□□□□ -1.91
ATXN1-210ENST00000498374 MUC2Q02817 5179 aa3.14□□□□□ -1.91
ATXN1-210ENST00000498374 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
ATXN1-210ENST00000498374 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
ATXN1-210ENST00000498374 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
ATXN1-210ENST00000498374 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
ATXN1-210ENST00000498374 M0R2T5 61 aa3.06□□□□□ -1.92
ATXN1-210ENST00000498374 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
ATXN1-210ENST00000498374 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
ATXN1-210ENST00000498374 MT1HP80294 61 aa3.04□□□□□ -1.92
ATXN1-210ENST00000498374 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
ATXN1-210ENST00000498374 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
ATXN1-210ENST00000498374 MT2AP02795 61 aa3□□□□□ -1.93
ATXN1-210ENST00000498374 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
ATXN1-210ENST00000498374 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
ATXN1-210ENST00000498374 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
ATXN1-210ENST00000498374 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
ATXN1-210ENST00000498374 MT1FP04733 61 aa2.97□□□□□ -1.93
ATXN1-210ENST00000498374 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
ATXN1-210ENST00000498374 KRTAP5-8O75690 187 aa2.9□□□□□ -1.94
ATXN1-210ENST00000498374 MT1BP07438 61 aa2.9□□□□□ -1.94
ATXN1-210ENST00000498374 MT1XP80297 61 aa2.9□□□□□ -1.95
ATXN1-210ENST00000498374 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
ATXN1-210ENST00000498374 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
ATXN1-210ENST00000498374 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
ATXN1-210ENST00000498374 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
ATXN1-210ENST00000498374 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
ATXN1-210ENST00000498374 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
ATXN1-210ENST00000498374 USH2AO75445 5202 aa2.62□□□□□ -1.99
ATXN1-210ENST00000498374 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
ATXN1-210ENST00000498374 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
ATXN1-210ENST00000498374 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
ATXN1-210ENST00000498374 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
ATXN1-210ENST00000498374 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
ATXN1-210ENST00000498374 SSPOA2VEC9 5147 aa2.55□□□□□ -2
ATXN1-210ENST00000498374 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
ATXN1-210ENST00000498374 KRTAP12-4P60329 112 aa2.54□□□□□ -2
ATXN1-210ENST00000498374 MT1EP04732 61 aa2.53□□□□□ -2
ATXN1-210ENST00000498374 MT1LQ93083 61 aa2.53□□□□□ -2
ATXN1-210ENST00000498374 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
ATXN1-210ENST00000498374 KMT2DO14686 5537 aa2.44□□□□□ -2.02
ATXN1-210ENST00000498374 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
ATXN1-210ENST00000498374 MT1GP13640 62 aa2.4□□□□□ -2.03
ATXN1-210ENST00000498374 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
ATXN1-210ENST00000498374 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
ATXN1-210ENST00000498374 MT1MQ8N339 61 aa2.36□□□□□ -2.03
ATXN1-210ENST00000498374 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
ATXN1-210ENST00000498374 LCE1CQ5T751 118 aa2.34□□□□□ -2.04
ATXN1-210ENST00000498374 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
ATXN1-210ENST00000498374 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.05
ATXN1-210ENST00000498374 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
ATXN1-210ENST00000498374 MT1AP04731 61 aa2.23□□□□□ -2.05
ATXN1-210ENST00000498374 SPRR2EP22531 72 aa2.2□□□□□ -2.06
ATXN1-210ENST00000498374 SPRR2BP35325 72 aa2.2□□□□□ -2.06
ATXN1-210ENST00000498374 SPRR2AP35326 72 aa2.2□□□□□ -2.06
ATXN1-210ENST00000498374 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
ATXN1-210ENST00000498374 NEBP20929 6669 aa2.14□□□□□ -2.07
ATXN1-210ENST00000498374 SPRR2DP22532 72 aa2.13□□□□□ -2.07
ATXN1-210ENST00000498374 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
ATXN1-210ENST00000498374 KRTAP20-1Q3LI63 56 aa2.09□□□□□ -2.08
ATXN1-210ENST00000498374 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
ATXN1-210ENST00000498374 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
ATXN1-210ENST00000498374 PRM1P04553 51 aa1.95□□□□□ -2.1
ATXN1-210ENST00000498374 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
ATXN1-210ENST00000498374 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
ATXN1-210ENST00000498374 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
ATXN1-210ENST00000498374 MT4P47944 62 aa1.86□□□□□ -2.11
ATXN1-210ENST00000498374 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
ATXN1-210ENST00000498374 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
ATXN1-210ENST00000498374 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
ATXN1-210ENST00000498374 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
ATXN1-210ENST00000498374 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
ATXN1-210ENST00000498374 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
ATXN1-210ENST00000498374 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
ATXN1-210ENST00000498374 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
ATXN1-210ENST00000498374 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
ATXN1-210ENST00000498374 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
ATXN1-210ENST00000498374 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 68.2 ms