RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
CPNE1-227ENST00000498056 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
CPNE1-227ENST00000498056 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
CPNE1-227ENST00000498056 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
CPNE1-227ENST00000498056 SPRR2DP22532 72 aa4.85□□□□□ -1.63
CPNE1-227ENST00000498056 MT1LQ93083 61 aa4.85□□□□□ -1.63
CPNE1-227ENST00000498056 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
CPNE1-227ENST00000498056 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
CPNE1-227ENST00000498056 MT1GP13640 62 aa4.77□□□□□ -1.65
CPNE1-227ENST00000498056 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
CPNE1-227ENST00000498056 MT1MQ8N339 61 aa4.74□□□□□ -1.65
CPNE1-227ENST00000498056 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
CPNE1-227ENST00000498056 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
CPNE1-227ENST00000498056 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
CPNE1-227ENST00000498056 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
CPNE1-227ENST00000498056 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
CPNE1-227ENST00000498056 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
CPNE1-227ENST00000498056 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
CPNE1-227ENST00000498056 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
CPNE1-227ENST00000498056 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
CPNE1-227ENST00000498056 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
CPNE1-227ENST00000498056 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
CPNE1-227ENST00000498056 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
CPNE1-227ENST00000498056 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
CPNE1-227ENST00000498056 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
CPNE1-227ENST00000498056 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
CPNE1-227ENST00000498056 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
CPNE1-227ENST00000498056 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
CPNE1-227ENST00000498056 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
CPNE1-227ENST00000498056 MT4P47944 62 aa4.22□□□□□ -1.73
CPNE1-227ENST00000498056 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
CPNE1-227ENST00000498056 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
CPNE1-227ENST00000498056 MT1AP04731 61 aa4.14□□□□□ -1.75
CPNE1-227ENST00000498056 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
CPNE1-227ENST00000498056 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
CPNE1-227ENST00000498056 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
CPNE1-227ENST00000498056 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
CPNE1-227ENST00000498056 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
CPNE1-227ENST00000498056 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CPNE1-227ENST00000498056 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
CPNE1-227ENST00000498056 H3BS24 57 aa3.95□□□□□ -1.78
CPNE1-227ENST00000498056 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
CPNE1-227ENST00000498056 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
CPNE1-227ENST00000498056 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
CPNE1-227ENST00000498056 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
CPNE1-227ENST00000498056 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
CPNE1-227ENST00000498056 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CPNE1-227ENST00000498056 MT3P25713 68 aa3.75□□□□□ -1.81
CPNE1-227ENST00000498056 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
CPNE1-227ENST00000498056 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
CPNE1-227ENST00000498056 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
CPNE1-227ENST00000498056 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CPNE1-227ENST00000498056 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
CPNE1-227ENST00000498056 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
CPNE1-227ENST00000498056 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
CPNE1-227ENST00000498056 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
CPNE1-227ENST00000498056 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
CPNE1-227ENST00000498056 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
CPNE1-227ENST00000498056 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CPNE1-227ENST00000498056 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
CPNE1-227ENST00000498056 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
CPNE1-227ENST00000498056 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
CPNE1-227ENST00000498056 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
CPNE1-227ENST00000498056 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
CPNE1-227ENST00000498056 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
CPNE1-227ENST00000498056 INE1O15225 51 aa3.03□□□□□ -1.92
CPNE1-227ENST00000498056 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
CPNE1-227ENST00000498056 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
CPNE1-227ENST00000498056 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
CPNE1-227ENST00000498056 PRM1P04553 51 aa2.72□□□□□ -1.97
CPNE1-227ENST00000498056 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
CPNE1-227ENST00000498056 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
CPNE1-227ENST00000498056 LCE1FQ5T754 118 aa2.56□□□□□ -2
CPNE1-227ENST00000498056 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
CPNE1-227ENST00000498056 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
CPNE1-227ENST00000498056 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
CPNE1-227ENST00000498056 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CPNE1-227ENST00000498056 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 73.3 ms