RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
SPTBN1-205ENST00000496323 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
SPTBN1-205ENST00000496323 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
SPTBN1-205ENST00000496323 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
SPTBN1-205ENST00000496323 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
SPTBN1-205ENST00000496323 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
SPTBN1-205ENST00000496323 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
SPTBN1-205ENST00000496323 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
SPTBN1-205ENST00000496323 MT1GP13640 62 aa4.65□□□□□ -1.66
SPTBN1-205ENST00000496323 KRTAP5-9P26371 169 aa4.65□□□□□ -1.66
SPTBN1-205ENST00000496323 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
SPTBN1-205ENST00000496323 MT1MQ8N339 61 aa4.64□□□□□ -1.67
SPTBN1-205ENST00000496323 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
SPTBN1-205ENST00000496323 INE1O15225 51 aa4.62□□□□□ -1.67
SPTBN1-205ENST00000496323 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
SPTBN1-205ENST00000496323 MDN1Q9NU22 5596 aa4.59□□□□□ -1.67
SPTBN1-205ENST00000496323 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-205ENST00000496323 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
SPTBN1-205ENST00000496323 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
SPTBN1-205ENST00000496323 SPRR2EP22531 72 aa4.45□□□□□ -1.7
SPTBN1-205ENST00000496323 SPRR2BP35325 72 aa4.45□□□□□ -1.7
SPTBN1-205ENST00000496323 SPRR2AP35326 72 aa4.45□□□□□ -1.7
SPTBN1-205ENST00000496323 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-205ENST00000496323 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
SPTBN1-205ENST00000496323 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
SPTBN1-205ENST00000496323 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
SPTBN1-205ENST00000496323 SPRR2DP22532 72 aa4.28□□□□□ -1.72
SPTBN1-205ENST00000496323 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
SPTBN1-205ENST00000496323 NEBP20929 6669 aa4.23□□□□□ -1.73
SPTBN1-205ENST00000496323 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-205ENST00000496323 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
SPTBN1-205ENST00000496323 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
SPTBN1-205ENST00000496323 MT1AP04731 61 aa4.1□□□□□ -1.75
SPTBN1-205ENST00000496323 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
SPTBN1-205ENST00000496323 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
SPTBN1-205ENST00000496323 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
SPTBN1-205ENST00000496323 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
SPTBN1-205ENST00000496323 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
SPTBN1-205ENST00000496323 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
SPTBN1-205ENST00000496323 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
SPTBN1-205ENST00000496323 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
SPTBN1-205ENST00000496323 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
SPTBN1-205ENST00000496323 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
SPTBN1-205ENST00000496323 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
SPTBN1-205ENST00000496323 MT4P47944 62 aa3.75□□□□□ -1.81
SPTBN1-205ENST00000496323 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SPTBN1-205ENST00000496323 MT3P25713 68 aa3.7□□□□□ -1.82
SPTBN1-205ENST00000496323 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
SPTBN1-205ENST00000496323 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
SPTBN1-205ENST00000496323 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
SPTBN1-205ENST00000496323 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
SPTBN1-205ENST00000496323 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
SPTBN1-205ENST00000496323 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
SPTBN1-205ENST00000496323 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
SPTBN1-205ENST00000496323 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SPTBN1-205ENST00000496323 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
SPTBN1-205ENST00000496323 PRM1P04553 51 aa3.19□□□□□ -1.9
SPTBN1-205ENST00000496323 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SPTBN1-205ENST00000496323 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
SPTBN1-205ENST00000496323 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
SPTBN1-205ENST00000496323 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
SPTBN1-205ENST00000496323 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
SPTBN1-205ENST00000496323 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.93
SPTBN1-205ENST00000496323 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SPTBN1-205ENST00000496323 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
SPTBN1-205ENST00000496323 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
SPTBN1-205ENST00000496323 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
SPTBN1-205ENST00000496323 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
SPTBN1-205ENST00000496323 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
SPTBN1-205ENST00000496323 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
SPTBN1-205ENST00000496323 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SPTBN1-205ENST00000496323 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SPTBN1-205ENST00000496323 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SPTBN1-205ENST00000496323 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
SPTBN1-205ENST00000496323 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SPTBN1-205ENST00000496323 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SPTBN1-205ENST00000496323 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SPTBN1-205ENST00000496323 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 118.8 ms