RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
BRD9-213ENST00000495794 MUC2Q02817 5179 aa4.53□□□□□ -1.68
BRD9-213ENST00000495794 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
BRD9-213ENST00000495794 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
BRD9-213ENST00000495794 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
BRD9-213ENST00000495794 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
BRD9-213ENST00000495794 MT1MQ8N339 61 aa4.41□□□□□ -1.7
BRD9-213ENST00000495794 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
BRD9-213ENST00000495794 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
BRD9-213ENST00000495794 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
BRD9-213ENST00000495794 KRTAP9-2Q9BYQ4 174 aa4.22□□□□□ -1.73
BRD9-213ENST00000495794 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
BRD9-213ENST00000495794 MT3P25713 68 aa4.22□□□□□ -1.73
BRD9-213ENST00000495794 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
BRD9-213ENST00000495794 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
BRD9-213ENST00000495794 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
BRD9-213ENST00000495794 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
BRD9-213ENST00000495794 MT4P47944 62 aa4.1□□□□□ -1.75
BRD9-213ENST00000495794 PRM1P04553 51 aa4.09□□□□□ -1.75
BRD9-213ENST00000495794 MT1AP04731 61 aa4.08□□□□□ -1.76
BRD9-213ENST00000495794 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.77
BRD9-213ENST00000495794 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
BRD9-213ENST00000495794 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
BRD9-213ENST00000495794 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
BRD9-213ENST00000495794 USH2AO75445 5202 aa3.96□□□□□ -1.78
BRD9-213ENST00000495794 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
BRD9-213ENST00000495794 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
BRD9-213ENST00000495794 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
BRD9-213ENST00000495794 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
BRD9-213ENST00000495794 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
BRD9-213ENST00000495794 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.79
BRD9-213ENST00000495794 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
BRD9-213ENST00000495794 KMT2DO14686 5537 aa3.86□□□□□ -1.79
BRD9-213ENST00000495794 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
BRD9-213ENST00000495794 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
BRD9-213ENST00000495794 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
BRD9-213ENST00000495794 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
BRD9-213ENST00000495794 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
BRD9-213ENST00000495794 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
BRD9-213ENST00000495794 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.82
BRD9-213ENST00000495794 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
BRD9-213ENST00000495794 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
BRD9-213ENST00000495794 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
BRD9-213ENST00000495794 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
BRD9-213ENST00000495794 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
BRD9-213ENST00000495794 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
BRD9-213ENST00000495794 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
BRD9-213ENST00000495794 NEBP20929 6669 aa3.27□□□□□ -1.89
BRD9-213ENST00000495794 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
BRD9-213ENST00000495794 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
BRD9-213ENST00000495794 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
BRD9-213ENST00000495794 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
BRD9-213ENST00000495794 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
BRD9-213ENST00000495794 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
BRD9-213ENST00000495794 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
BRD9-213ENST00000495794 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.93
BRD9-213ENST00000495794 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
BRD9-213ENST00000495794 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
BRD9-213ENST00000495794 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
BRD9-213ENST00000495794 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
BRD9-213ENST00000495794 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
BRD9-213ENST00000495794 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
BRD9-213ENST00000495794 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
BRD9-213ENST00000495794 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
BRD9-213ENST00000495794 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
BRD9-213ENST00000495794 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
BRD9-213ENST00000495794 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
BRD9-213ENST00000495794 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
BRD9-213ENST00000495794 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
BRD9-213ENST00000495794 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
BRD9-213ENST00000495794 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
BRD9-213ENST00000495794 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
BRD9-213ENST00000495794 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
BRD9-213ENST00000495794 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
BRD9-213ENST00000495794 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
BRD9-213ENST00000495794 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
BRD9-213ENST00000495794 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.12
BRD9-213ENST00000495794 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 85.7 ms