RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
KDM1A-205ENST00000494920 MT1EP04732 61 aa4.11□□□□□ -1.75
KDM1A-205ENST00000494920 ROMO1P60602 79 aa4.11□□□□□ -1.75
KDM1A-205ENST00000494920 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
KDM1A-205ENST00000494920 SPRR2EP22531 72 aa4.1□□□□□ -1.75
KDM1A-205ENST00000494920 SPRR2BP35325 72 aa4.1□□□□□ -1.75
KDM1A-205ENST00000494920 SPRR2AP35326 72 aa4.1□□□□□ -1.75
KDM1A-205ENST00000494920 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
KDM1A-205ENST00000494920 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
KDM1A-205ENST00000494920 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
KDM1A-205ENST00000494920 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
KDM1A-205ENST00000494920 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
KDM1A-205ENST00000494920 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
KDM1A-205ENST00000494920 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
KDM1A-205ENST00000494920 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
KDM1A-205ENST00000494920 SPRR2DP22532 72 aa3.96□□□□□ -1.78
KDM1A-205ENST00000494920 MT1LQ93083 61 aa3.96□□□□□ -1.78
KDM1A-205ENST00000494920 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
KDM1A-205ENST00000494920 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
KDM1A-205ENST00000494920 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
KDM1A-205ENST00000494920 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
KDM1A-205ENST00000494920 MT1GP13640 62 aa3.92□□□□□ -1.78
KDM1A-205ENST00000494920 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
KDM1A-205ENST00000494920 MT1MQ8N339 61 aa3.89□□□□□ -1.79
KDM1A-205ENST00000494920 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
KDM1A-205ENST00000494920 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
KDM1A-205ENST00000494920 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
KDM1A-205ENST00000494920 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
KDM1A-205ENST00000494920 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
KDM1A-205ENST00000494920 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
KDM1A-205ENST00000494920 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
KDM1A-205ENST00000494920 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
KDM1A-205ENST00000494920 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
KDM1A-205ENST00000494920 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
KDM1A-205ENST00000494920 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
KDM1A-205ENST00000494920 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
KDM1A-205ENST00000494920 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
KDM1A-205ENST00000494920 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
KDM1A-205ENST00000494920 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
KDM1A-205ENST00000494920 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
KDM1A-205ENST00000494920 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
KDM1A-205ENST00000494920 MT3P25713 68 aa3.44□□□□□ -1.86
KDM1A-205ENST00000494920 MT4P47944 62 aa3.43□□□□□ -1.86
KDM1A-205ENST00000494920 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
KDM1A-205ENST00000494920 MT1AP04731 61 aa3.37□□□□□ -1.87
KDM1A-205ENST00000494920 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
KDM1A-205ENST00000494920 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
KDM1A-205ENST00000494920 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
KDM1A-205ENST00000494920 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
KDM1A-205ENST00000494920 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
KDM1A-205ENST00000494920 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
KDM1A-205ENST00000494920 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
KDM1A-205ENST00000494920 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
KDM1A-205ENST00000494920 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
KDM1A-205ENST00000494920 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
KDM1A-205ENST00000494920 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
KDM1A-205ENST00000494920 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
KDM1A-205ENST00000494920 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
KDM1A-205ENST00000494920 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
KDM1A-205ENST00000494920 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
KDM1A-205ENST00000494920 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
KDM1A-205ENST00000494920 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
KDM1A-205ENST00000494920 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
KDM1A-205ENST00000494920 INE1O15225 51 aa2.73□□□□□ -1.97
KDM1A-205ENST00000494920 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
KDM1A-205ENST00000494920 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
KDM1A-205ENST00000494920 LCE1CQ5T751 118 aa2.56□□□□□ -2
KDM1A-205ENST00000494920 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
KDM1A-205ENST00000494920 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
KDM1A-205ENST00000494920 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
KDM1A-205ENST00000494920 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
KDM1A-205ENST00000494920 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
KDM1A-205ENST00000494920 PRM1P04553 51 aa2.15□□□□□ -2.07
KDM1A-205ENST00000494920 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
KDM1A-205ENST00000494920 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
KDM1A-205ENST00000494920 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
KDM1A-205ENST00000494920 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
KDM1A-205ENST00000494920 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms