RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
UBR4-216ENST00000494503 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
UBR4-216ENST00000494503 K7ERU9 68 aa3.33□□□□□ -1.88
UBR4-216ENST00000494503 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
UBR4-216ENST00000494503 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
UBR4-216ENST00000494503 TNP1P09430 55 aa3.31□□□□□ -1.88
UBR4-216ENST00000494503 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
UBR4-216ENST00000494503 A8MU10 97 aa3.28□□□□□ -1.88
UBR4-216ENST00000494503 A0A1B0GU69 56 aa3.27□□□□□ -1.89
UBR4-216ENST00000494503 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
UBR4-216ENST00000494503 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
UBR4-216ENST00000494503 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
UBR4-216ENST00000494503 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
UBR4-216ENST00000494503 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
UBR4-216ENST00000494503 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
UBR4-216ENST00000494503 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
UBR4-216ENST00000494503 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
UBR4-216ENST00000494503 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
UBR4-216ENST00000494503 COX7CP15954 63 aa3.16□□□□□ -1.9
UBR4-216ENST00000494503 V9GYY9 64 aa3.16□□□□□ -1.9
UBR4-216ENST00000494503 H7BZZ5 65 aa3.14□□□□□ -1.91
UBR4-216ENST00000494503 PRR15LQ9BU68 103 aa3.12□□□□□ -1.91
UBR4-216ENST00000494503 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
UBR4-216ENST00000494503 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
UBR4-216ENST00000494503 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
UBR4-216ENST00000494503 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
UBR4-216ENST00000494503 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
UBR4-216ENST00000494503 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
UBR4-216ENST00000494503 UQCR11O14957 56 aa2.98□□□□□ -1.93
UBR4-216ENST00000494503 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
UBR4-216ENST00000494503 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
UBR4-216ENST00000494503 LINC01558Q9Y6Z2 57 aa2.96□□□□□ -1.94
UBR4-216ENST00000494503 K7ERS5 55 aa2.94□□□□□ -1.94
UBR4-216ENST00000494503 ATP5EP56381 51 aaPredicted RBP2.93□□□□□ -1.94
UBR4-216ENST00000494503 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
UBR4-216ENST00000494503 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
UBR4-216ENST00000494503 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
UBR4-216ENST00000494503 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
UBR4-216ENST00000494503 MT1AP04731 61 aa2.88□□□□□ -1.95
UBR4-216ENST00000494503 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
UBR4-216ENST00000494503 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
UBR4-216ENST00000494503 PSPHP1O15172 72 aa2.85□□□□□ -1.95
UBR4-216ENST00000494503 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
UBR4-216ENST00000494503 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
UBR4-216ENST00000494503 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
UBR4-216ENST00000494503 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
UBR4-216ENST00000494503 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
UBR4-216ENST00000494503 TMEM258P61165 79 aa2.78□□□□□ -1.96
UBR4-216ENST00000494503 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
UBR4-216ENST00000494503 RPS28P62857 69 aaKnown RBP2.75□□□□□ -1.97
UBR4-216ENST00000494503 CDC42SE1Q9NRR8 79 aa2.73□□□□□ -1.97
UBR4-216ENST00000494503 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
UBR4-216ENST00000494503 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
UBR4-216ENST00000494503 A6NED7 52 aa2.67□□□□□ -1.98
UBR4-216ENST00000494503 MT3P25713 68 aa2.66□□□□□ -1.98
UBR4-216ENST00000494503 Q1T7F1 81 aa2.66□□□□□ -1.98
UBR4-216ENST00000494503 ROMO1P60602 79 aa2.64□□□□□ -1.99
UBR4-216ENST00000494503 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
UBR4-216ENST00000494503 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
UBR4-216ENST00000494503 PMAIP1Q13794 54 aa2.6□□□□□ -1.99
UBR4-216ENST00000494503 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
UBR4-216ENST00000494503 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
UBR4-216ENST00000494503 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
UBR4-216ENST00000494503 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
UBR4-216ENST00000494503 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
UBR4-216ENST00000494503 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
UBR4-216ENST00000494503 BRK1Q8WUW1 75 aa2.13□□□□□ -2.07
UBR4-216ENST00000494503 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
UBR4-216ENST00000494503 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
UBR4-216ENST00000494503 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
UBR4-216ENST00000494503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
UBR4-216ENST00000494503 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
UBR4-216ENST00000494503 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
UBR4-216ENST00000494503 INE1O15225 51 aa1.72□□□□□ -2.13
UBR4-216ENST00000494503 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
UBR4-216ENST00000494503 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
UBR4-216ENST00000494503 PRM1P04553 51 aa1.36□□□□□ -2.19
UBR4-216ENST00000494503 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms