RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
PDLIM7-208ENST00000493815 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
PDLIM7-208ENST00000493815 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
PDLIM7-208ENST00000493815 MT1EP04732 61 aa6.61□□□□□ -1.35
PDLIM7-208ENST00000493815 SPRR2DP22532 72 aa6.49□□□□□ -1.37
PDLIM7-208ENST00000493815 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
PDLIM7-208ENST00000493815 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
PDLIM7-208ENST00000493815 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
PDLIM7-208ENST00000493815 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
PDLIM7-208ENST00000493815 MT1LQ93083 61 aa6.39□□□□□ -1.39
PDLIM7-208ENST00000493815 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
PDLIM7-208ENST00000493815 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
PDLIM7-208ENST00000493815 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
PDLIM7-208ENST00000493815 MT1GP13640 62 aa6.33□□□□□ -1.4
PDLIM7-208ENST00000493815 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
PDLIM7-208ENST00000493815 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
PDLIM7-208ENST00000493815 MT1MQ8N339 61 aa6.26□□□□□ -1.41
PDLIM7-208ENST00000493815 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
PDLIM7-208ENST00000493815 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
PDLIM7-208ENST00000493815 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
PDLIM7-208ENST00000493815 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
PDLIM7-208ENST00000493815 KRTAP2-2Q9BYT5 123 aa6.19□□□□□ -1.42
PDLIM7-208ENST00000493815 KRTAP2-1Q9BYU5 128 aa6.19□□□□□ -1.42
PDLIM7-208ENST00000493815 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
PDLIM7-208ENST00000493815 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
PDLIM7-208ENST00000493815 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
PDLIM7-208ENST00000493815 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
PDLIM7-208ENST00000493815 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
PDLIM7-208ENST00000493815 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
PDLIM7-208ENST00000493815 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
PDLIM7-208ENST00000493815 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
PDLIM7-208ENST00000493815 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
PDLIM7-208ENST00000493815 MT4P47944 62 aa5.69□□□□□ -1.5
PDLIM7-208ENST00000493815 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
PDLIM7-208ENST00000493815 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
PDLIM7-208ENST00000493815 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
PDLIM7-208ENST00000493815 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
PDLIM7-208ENST00000493815 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
PDLIM7-208ENST00000493815 MT1AP04731 61 aa5.42□□□□□ -1.54
PDLIM7-208ENST00000493815 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
PDLIM7-208ENST00000493815 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
PDLIM7-208ENST00000493815 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
PDLIM7-208ENST00000493815 INE1O15225 51 aa5.36□□□□□ -1.55
PDLIM7-208ENST00000493815 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
PDLIM7-208ENST00000493815 AHNAK2Q8IVF2 5795 aa5.23□□□□□ -1.57
PDLIM7-208ENST00000493815 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
PDLIM7-208ENST00000493815 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
PDLIM7-208ENST00000493815 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
PDLIM7-208ENST00000493815 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
PDLIM7-208ENST00000493815 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
PDLIM7-208ENST00000493815 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
PDLIM7-208ENST00000493815 MT3P25713 68 aa4.93□□□□□ -1.62
PDLIM7-208ENST00000493815 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
PDLIM7-208ENST00000493815 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
PDLIM7-208ENST00000493815 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
PDLIM7-208ENST00000493815 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
PDLIM7-208ENST00000493815 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
PDLIM7-208ENST00000493815 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
PDLIM7-208ENST00000493815 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
PDLIM7-208ENST00000493815 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
PDLIM7-208ENST00000493815 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
PDLIM7-208ENST00000493815 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
PDLIM7-208ENST00000493815 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
PDLIM7-208ENST00000493815 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
PDLIM7-208ENST00000493815 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
PDLIM7-208ENST00000493815 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
PDLIM7-208ENST00000493815 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
PDLIM7-208ENST00000493815 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
PDLIM7-208ENST00000493815 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
PDLIM7-208ENST00000493815 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
PDLIM7-208ENST00000493815 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
PDLIM7-208ENST00000493815 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
PDLIM7-208ENST00000493815 PRM1P04553 51 aa3.4□□□□□ -1.86
PDLIM7-208ENST00000493815 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
PDLIM7-208ENST00000493815 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
PDLIM7-208ENST00000493815 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
PDLIM7-208ENST00000493815 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
PDLIM7-208ENST00000493815 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 145 ms