RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
VEGFA-214ENST00000493786 KMT2DO14686 5537 aa2.98□□□□□ -1.93
VEGFA-214ENST00000493786 ROMO1P60602 79 aa2.97□□□□□ -1.93
VEGFA-214ENST00000493786 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
VEGFA-214ENST00000493786 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
VEGFA-214ENST00000493786 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
VEGFA-214ENST00000493786 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
VEGFA-214ENST00000493786 MDN1Q9NU22 5596 aa2.9□□□□□ -1.94
VEGFA-214ENST00000493786 KRTAP15-1Q3LI76 137 aa2.89□□□□□ -1.95
VEGFA-214ENST00000493786 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
VEGFA-214ENST00000493786 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
VEGFA-214ENST00000493786 SPRR2EP22531 72 aa2.85□□□□□ -1.95
VEGFA-214ENST00000493786 SPRR2BP35325 72 aa2.85□□□□□ -1.95
VEGFA-214ENST00000493786 SPRR2AP35326 72 aa2.85□□□□□ -1.95
VEGFA-214ENST00000493786 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
VEGFA-214ENST00000493786 NEBP20929 6669 aa2.84□□□□□ -1.96
VEGFA-214ENST00000493786 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
VEGFA-214ENST00000493786 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
VEGFA-214ENST00000493786 MT1EP04732 61 aa2.8□□□□□ -1.96
VEGFA-214ENST00000493786 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
VEGFA-214ENST00000493786 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
VEGFA-214ENST00000493786 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
VEGFA-214ENST00000493786 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
VEGFA-214ENST00000493786 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
VEGFA-214ENST00000493786 SPRR2DP22532 72 aa2.75□□□□□ -1.97
VEGFA-214ENST00000493786 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
VEGFA-214ENST00000493786 MT1GP13640 62 aa2.71□□□□□ -1.98
VEGFA-214ENST00000493786 MT1LQ93083 61 aa2.71□□□□□ -1.98
VEGFA-214ENST00000493786 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
VEGFA-214ENST00000493786 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
VEGFA-214ENST00000493786 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
VEGFA-214ENST00000493786 MT1MQ8N339 61 aa2.65□□□□□ -1.99
VEGFA-214ENST00000493786 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
VEGFA-214ENST00000493786 KRTAP2-1Q9BYU5 128 aa2.61□□□□□ -1.99
VEGFA-214ENST00000493786 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
VEGFA-214ENST00000493786 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
VEGFA-214ENST00000493786 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
VEGFA-214ENST00000493786 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
VEGFA-214ENST00000493786 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
VEGFA-214ENST00000493786 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
VEGFA-214ENST00000493786 MT4P47944 62 aa2.38□□□□□ -2.03
VEGFA-214ENST00000493786 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
VEGFA-214ENST00000493786 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
VEGFA-214ENST00000493786 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
VEGFA-214ENST00000493786 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
VEGFA-214ENST00000493786 MT1AP04731 61 aa2.32□□□□□ -2.04
VEGFA-214ENST00000493786 INE1O15225 51 aa2.31□□□□□ -2.04
VEGFA-214ENST00000493786 MT3P25713 68 aa2.28□□□□□ -2.04
VEGFA-214ENST00000493786 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
VEGFA-214ENST00000493786 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
VEGFA-214ENST00000493786 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
VEGFA-214ENST00000493786 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
VEGFA-214ENST00000493786 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
VEGFA-214ENST00000493786 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
VEGFA-214ENST00000493786 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
VEGFA-214ENST00000493786 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
VEGFA-214ENST00000493786 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
VEGFA-214ENST00000493786 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
VEGFA-214ENST00000493786 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
VEGFA-214ENST00000493786 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
VEGFA-214ENST00000493786 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
VEGFA-214ENST00000493786 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
VEGFA-214ENST00000493786 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
VEGFA-214ENST00000493786 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
VEGFA-214ENST00000493786 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
VEGFA-214ENST00000493786 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
VEGFA-214ENST00000493786 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
VEGFA-214ENST00000493786 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
VEGFA-214ENST00000493786 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
VEGFA-214ENST00000493786 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
VEGFA-214ENST00000493786 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
VEGFA-214ENST00000493786 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
VEGFA-214ENST00000493786 PRM1P04553 51 aa1.52□□□□□ -2.17
VEGFA-214ENST00000493786 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
VEGFA-214ENST00000493786 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
VEGFA-214ENST00000493786 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
VEGFA-214ENST00000493786 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
VEGFA-214ENST00000493786 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms