RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
SMARCE1-211ENST00000493660 MT1BP07438 61 aa3.05□□□□□ -1.92
SMARCE1-211ENST00000493660 NEBP20929 6669 aa3.02□□□□□ -1.93
SMARCE1-211ENST00000493660 TNP1P09430 55 aa3□□□□□ -1.93
SMARCE1-211ENST00000493660 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
SMARCE1-211ENST00000493660 MT1XP80297 61 aa2.94□□□□□ -1.94
SMARCE1-211ENST00000493660 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
SMARCE1-211ENST00000493660 USH2AO75445 5202 aa2.93□□□□□ -1.94
SMARCE1-211ENST00000493660 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
SMARCE1-211ENST00000493660 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SMARCE1-211ENST00000493660 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
SMARCE1-211ENST00000493660 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
SMARCE1-211ENST00000493660 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
SMARCE1-211ENST00000493660 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
SMARCE1-211ENST00000493660 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
SMARCE1-211ENST00000493660 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
SMARCE1-211ENST00000493660 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SMARCE1-211ENST00000493660 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
SMARCE1-211ENST00000493660 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
SMARCE1-211ENST00000493660 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
SMARCE1-211ENST00000493660 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SMARCE1-211ENST00000493660 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
SMARCE1-211ENST00000493660 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
SMARCE1-211ENST00000493660 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
SMARCE1-211ENST00000493660 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
SMARCE1-211ENST00000493660 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
SMARCE1-211ENST00000493660 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.99
SMARCE1-211ENST00000493660 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
SMARCE1-211ENST00000493660 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
SMARCE1-211ENST00000493660 KMT2DO14686 5537 aa2.6□□□□□ -1.99
SMARCE1-211ENST00000493660 MT1EP04732 61 aa2.59□□□□□ -1.99
SMARCE1-211ENST00000493660 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
SMARCE1-211ENST00000493660 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
SMARCE1-211ENST00000493660 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
SMARCE1-211ENST00000493660 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
SMARCE1-211ENST00000493660 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
SMARCE1-211ENST00000493660 MT1LQ93083 61 aa2.53□□□□□ -2
SMARCE1-211ENST00000493660 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
SMARCE1-211ENST00000493660 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
SMARCE1-211ENST00000493660 MT1GP13640 62 aa2.49□□□□□ -2.01
SMARCE1-211ENST00000493660 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
SMARCE1-211ENST00000493660 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
SMARCE1-211ENST00000493660 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
SMARCE1-211ENST00000493660 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
SMARCE1-211ENST00000493660 SPRR2EP22531 72 aa2.44□□□□□ -2.02
SMARCE1-211ENST00000493660 SPRR2BP35325 72 aa2.44□□□□□ -2.02
SMARCE1-211ENST00000493660 SPRR2AP35326 72 aa2.44□□□□□ -2.02
SMARCE1-211ENST00000493660 MT1MQ8N339 61 aa2.44□□□□□ -2.02
SMARCE1-211ENST00000493660 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
SMARCE1-211ENST00000493660 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
SMARCE1-211ENST00000493660 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
SMARCE1-211ENST00000493660 SPRR2DP22532 72 aa2.36□□□□□ -2.03
SMARCE1-211ENST00000493660 MDN1Q9NU22 5596 aa2.34□□□□□ -2.03
SMARCE1-211ENST00000493660 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
SMARCE1-211ENST00000493660 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
SMARCE1-211ENST00000493660 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
SMARCE1-211ENST00000493660 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
SMARCE1-211ENST00000493660 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SMARCE1-211ENST00000493660 MT1AP04731 61 aa2.17□□□□□ -2.06
SMARCE1-211ENST00000493660 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
SMARCE1-211ENST00000493660 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
SMARCE1-211ENST00000493660 PRM1P04553 51 aa2.13□□□□□ -2.07
SMARCE1-211ENST00000493660 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
SMARCE1-211ENST00000493660 MT3P25713 68 aa2.02□□□□□ -2.09
SMARCE1-211ENST00000493660 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
SMARCE1-211ENST00000493660 MT4P47944 62 aa2.02□□□□□ -2.09
SMARCE1-211ENST00000493660 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
SMARCE1-211ENST00000493660 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
SMARCE1-211ENST00000493660 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
SMARCE1-211ENST00000493660 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
SMARCE1-211ENST00000493660 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
SMARCE1-211ENST00000493660 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
SMARCE1-211ENST00000493660 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
SMARCE1-211ENST00000493660 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
SMARCE1-211ENST00000493660 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
SMARCE1-211ENST00000493660 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
SMARCE1-211ENST00000493660 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
SMARCE1-211ENST00000493660 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms