RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
PHGDH-206ENST00000493622 USH2AO75445 5202 aa3.48□□□□□ -1.85
PHGDH-206ENST00000493622 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
PHGDH-206ENST00000493622 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
PHGDH-206ENST00000493622 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
PHGDH-206ENST00000493622 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
PHGDH-206ENST00000493622 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
PHGDH-206ENST00000493622 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
PHGDH-206ENST00000493622 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
PHGDH-206ENST00000493622 MT1EP04732 61 aa3.25□□□□□ -1.89
PHGDH-206ENST00000493622 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
PHGDH-206ENST00000493622 KMT2DO14686 5537 aa3.23□□□□□ -1.89
PHGDH-206ENST00000493622 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
PHGDH-206ENST00000493622 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
PHGDH-206ENST00000493622 MT1LQ93083 61 aa3.2□□□□□ -1.9
PHGDH-206ENST00000493622 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
PHGDH-206ENST00000493622 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
PHGDH-206ENST00000493622 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
PHGDH-206ENST00000493622 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
PHGDH-206ENST00000493622 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.91
PHGDH-206ENST00000493622 KRTAP19-3Q7Z4W3 81 aa3.07□□□□□ -1.92
PHGDH-206ENST00000493622 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
PHGDH-206ENST00000493622 MT1MQ8N339 61 aa3.04□□□□□ -1.92
PHGDH-206ENST00000493622 MT1GP13640 62 aa3.03□□□□□ -1.92
PHGDH-206ENST00000493622 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
PHGDH-206ENST00000493622 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
PHGDH-206ENST00000493622 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
PHGDH-206ENST00000493622 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
PHGDH-206ENST00000493622 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
PHGDH-206ENST00000493622 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
PHGDH-206ENST00000493622 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
PHGDH-206ENST00000493622 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
PHGDH-206ENST00000493622 NEBP20929 6669 aa2.89□□□□□ -1.95
PHGDH-206ENST00000493622 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
PHGDH-206ENST00000493622 SPRR2EP22531 72 aa2.83□□□□□ -1.96
PHGDH-206ENST00000493622 SPRR2BP35325 72 aa2.83□□□□□ -1.96
PHGDH-206ENST00000493622 SPRR2AP35326 72 aa2.83□□□□□ -1.96
PHGDH-206ENST00000493622 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
PHGDH-206ENST00000493622 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
PHGDH-206ENST00000493622 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
PHGDH-206ENST00000493622 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
PHGDH-206ENST00000493622 INE1O15225 51 aa2.72□□□□□ -1.97
PHGDH-206ENST00000493622 SPRR2DP22532 72 aa2.72□□□□□ -1.97
PHGDH-206ENST00000493622 MT1AP04731 61 aa2.71□□□□□ -1.98
PHGDH-206ENST00000493622 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
PHGDH-206ENST00000493622 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
PHGDH-206ENST00000493622 MT3P25713 68 aa2.62□□□□□ -1.99
PHGDH-206ENST00000493622 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
PHGDH-206ENST00000493622 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
PHGDH-206ENST00000493622 LCE1FQ5T754 118 aa2.58□□□□□ -2
PHGDH-206ENST00000493622 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
PHGDH-206ENST00000493622 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
PHGDH-206ENST00000493622 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
PHGDH-206ENST00000493622 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
PHGDH-206ENST00000493622 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
PHGDH-206ENST00000493622 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
PHGDH-206ENST00000493622 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
PHGDH-206ENST00000493622 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
PHGDH-206ENST00000493622 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
PHGDH-206ENST00000493622 MT4P47944 62 aa2.35□□□□□ -2.03
PHGDH-206ENST00000493622 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
PHGDH-206ENST00000493622 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
PHGDH-206ENST00000493622 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
PHGDH-206ENST00000493622 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
PHGDH-206ENST00000493622 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.06
PHGDH-206ENST00000493622 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
PHGDH-206ENST00000493622 PRM1P04553 51 aa2.13□□□□□ -2.07
PHGDH-206ENST00000493622 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
PHGDH-206ENST00000493622 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
PHGDH-206ENST00000493622 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
PHGDH-206ENST00000493622 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
PHGDH-206ENST00000493622 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
PHGDH-206ENST00000493622 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
PHGDH-206ENST00000493622 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
PHGDH-206ENST00000493622 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
PHGDH-206ENST00000493622 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
PHGDH-206ENST00000493622 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
PHGDH-206ENST00000493622 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 17.8 ms