RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
CACUL1-206ENST00000493518 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
CACUL1-206ENST00000493518 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
CACUL1-206ENST00000493518 MT1LQ93083 61 aa5.29□□□□□ -1.56
CACUL1-206ENST00000493518 MT1EP04732 61 aa5.26□□□□□ -1.57
CACUL1-206ENST00000493518 MT1GP13640 62 aa5.23□□□□□ -1.57
CACUL1-206ENST00000493518 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
CACUL1-206ENST00000493518 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
CACUL1-206ENST00000493518 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
CACUL1-206ENST00000493518 SYNE2Q8WXH0 6885 aaKnown RBP5.13□□□□□ -1.59
CACUL1-206ENST00000493518 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
CACUL1-206ENST00000493518 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
CACUL1-206ENST00000493518 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
CACUL1-206ENST00000493518 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
CACUL1-206ENST00000493518 MT1MQ8N339 61 aa4.93□□□□□ -1.62
CACUL1-206ENST00000493518 SPRR2FQ96RM1 72 aa4.93□□□□□ -1.62
CACUL1-206ENST00000493518 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
CACUL1-206ENST00000493518 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
CACUL1-206ENST00000493518 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
CACUL1-206ENST00000493518 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
CACUL1-206ENST00000493518 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
CACUL1-206ENST00000493518 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CACUL1-206ENST00000493518 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
CACUL1-206ENST00000493518 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
CACUL1-206ENST00000493518 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
CACUL1-206ENST00000493518 PRM1P04553 51 aa4.43□□□□□ -1.7
CACUL1-206ENST00000493518 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
CACUL1-206ENST00000493518 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CACUL1-206ENST00000493518 SPRR2EP22531 72 aa4.36□□□□□ -1.71
CACUL1-206ENST00000493518 SPRR2BP35325 72 aa4.36□□□□□ -1.71
CACUL1-206ENST00000493518 SPRR2AP35326 72 aa4.36□□□□□ -1.71
CACUL1-206ENST00000493518 MT1AP04731 61 aa4.34□□□□□ -1.71
CACUL1-206ENST00000493518 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
CACUL1-206ENST00000493518 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
CACUL1-206ENST00000493518 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
CACUL1-206ENST00000493518 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
CACUL1-206ENST00000493518 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
CACUL1-206ENST00000493518 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
CACUL1-206ENST00000493518 SPRR2DP22532 72 aa4.13□□□□□ -1.75
CACUL1-206ENST00000493518 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
CACUL1-206ENST00000493518 MT3P25713 68 aa3.96□□□□□ -1.78
CACUL1-206ENST00000493518 MT4P47944 62 aa3.89□□□□□ -1.79
CACUL1-206ENST00000493518 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
CACUL1-206ENST00000493518 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
CACUL1-206ENST00000493518 NEBP20929 6669 aa3.78□□□□□ -1.8
CACUL1-206ENST00000493518 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
CACUL1-206ENST00000493518 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
CACUL1-206ENST00000493518 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
CACUL1-206ENST00000493518 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
CACUL1-206ENST00000493518 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CACUL1-206ENST00000493518 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
CACUL1-206ENST00000493518 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
CACUL1-206ENST00000493518 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
CACUL1-206ENST00000493518 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
CACUL1-206ENST00000493518 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
CACUL1-206ENST00000493518 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
CACUL1-206ENST00000493518 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
CACUL1-206ENST00000493518 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
CACUL1-206ENST00000493518 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.88
CACUL1-206ENST00000493518 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
CACUL1-206ENST00000493518 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
CACUL1-206ENST00000493518 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
CACUL1-206ENST00000493518 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
CACUL1-206ENST00000493518 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
CACUL1-206ENST00000493518 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
CACUL1-206ENST00000493518 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
CACUL1-206ENST00000493518 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CACUL1-206ENST00000493518 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
CACUL1-206ENST00000493518 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
CACUL1-206ENST00000493518 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
CACUL1-206ENST00000493518 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
CACUL1-206ENST00000493518 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CACUL1-206ENST00000493518 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
CACUL1-206ENST00000493518 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
CACUL1-206ENST00000493518 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.02
CACUL1-206ENST00000493518 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
CACUL1-206ENST00000493518 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
CACUL1-206ENST00000493518 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 173 ms