RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 MUC12Q9UKN1 5478 aa5.86□□□□□ -1.47
HPS4-216ENST00000493455 MT1EP04732 61 aa5.8□□□□□ -1.48
HPS4-216ENST00000493455 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
HPS4-216ENST00000493455 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
HPS4-216ENST00000493455 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
HPS4-216ENST00000493455 NEBP20929 6669 aa5.73□□□□□ -1.49
HPS4-216ENST00000493455 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
HPS4-216ENST00000493455 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
HPS4-216ENST00000493455 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
HPS4-216ENST00000493455 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
HPS4-216ENST00000493455 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
HPS4-216ENST00000493455 SPRR2DP22532 72 aa5.66□□□□□ -1.5
HPS4-216ENST00000493455 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
HPS4-216ENST00000493455 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.5
HPS4-216ENST00000493455 MT1LQ93083 61 aa5.62□□□□□ -1.51
HPS4-216ENST00000493455 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
HPS4-216ENST00000493455 MT1GP13640 62 aa5.56□□□□□ -1.52
HPS4-216ENST00000493455 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
HPS4-216ENST00000493455 MT1MQ8N339 61 aa5.51□□□□□ -1.53
HPS4-216ENST00000493455 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
HPS4-216ENST00000493455 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
HPS4-216ENST00000493455 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
HPS4-216ENST00000493455 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
HPS4-216ENST00000493455 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
HPS4-216ENST00000493455 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
HPS4-216ENST00000493455 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
HPS4-216ENST00000493455 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
HPS4-216ENST00000493455 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
HPS4-216ENST00000493455 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
HPS4-216ENST00000493455 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
HPS4-216ENST00000493455 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
HPS4-216ENST00000493455 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
HPS4-216ENST00000493455 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
HPS4-216ENST00000493455 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
HPS4-216ENST00000493455 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
HPS4-216ENST00000493455 MT4P47944 62 aa4.94□□□□□ -1.62
HPS4-216ENST00000493455 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
HPS4-216ENST00000493455 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
HPS4-216ENST00000493455 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
HPS4-216ENST00000493455 MT1AP04731 61 aa4.79□□□□□ -1.64
HPS4-216ENST00000493455 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
HPS4-216ENST00000493455 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
HPS4-216ENST00000493455 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.65
HPS4-216ENST00000493455 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
HPS4-216ENST00000493455 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
HPS4-216ENST00000493455 H3BS24 57 aa4.58□□□□□ -1.68
HPS4-216ENST00000493455 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
HPS4-216ENST00000493455 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
HPS4-216ENST00000493455 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
HPS4-216ENST00000493455 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
HPS4-216ENST00000493455 MT3P25713 68 aa4.36□□□□□ -1.71
HPS4-216ENST00000493455 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
HPS4-216ENST00000493455 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
HPS4-216ENST00000493455 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
HPS4-216ENST00000493455 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
HPS4-216ENST00000493455 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
HPS4-216ENST00000493455 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
HPS4-216ENST00000493455 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
HPS4-216ENST00000493455 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
HPS4-216ENST00000493455 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
HPS4-216ENST00000493455 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
HPS4-216ENST00000493455 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
HPS4-216ENST00000493455 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
HPS4-216ENST00000493455 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
HPS4-216ENST00000493455 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
HPS4-216ENST00000493455 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
HPS4-216ENST00000493455 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
HPS4-216ENST00000493455 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
HPS4-216ENST00000493455 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
HPS4-216ENST00000493455 INE1O15225 51 aa3.33□□□□□ -1.88
HPS4-216ENST00000493455 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
HPS4-216ENST00000493455 PRM1P04553 51 aa3.13□□□□□ -1.91
HPS4-216ENST00000493455 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
HPS4-216ENST00000493455 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
HPS4-216ENST00000493455 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
HPS4-216ENST00000493455 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
HPS4-216ENST00000493455 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
HPS4-216ENST00000493455 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 90.8 ms