RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
NUCB1-212ENST00000492367 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
NUCB1-212ENST00000492367 MT1GP13640 62 aa6.69□□□□□ -1.34
NUCB1-212ENST00000492367 SPRR2EP22531 72 aa6.65□□□□□ -1.35
NUCB1-212ENST00000492367 SPRR2BP35325 72 aa6.65□□□□□ -1.35
NUCB1-212ENST00000492367 SPRR2AP35326 72 aa6.65□□□□□ -1.35
NUCB1-212ENST00000492367 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
NUCB1-212ENST00000492367 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
NUCB1-212ENST00000492367 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
NUCB1-212ENST00000492367 MT1MQ8N339 61 aa6.56□□□□□ -1.36
NUCB1-212ENST00000492367 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
NUCB1-212ENST00000492367 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
NUCB1-212ENST00000492367 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
NUCB1-212ENST00000492367 SPRR2DP22532 72 aa6.42□□□□□ -1.38
NUCB1-212ENST00000492367 H3BS24 57 aa6.36□□□□□ -1.39
NUCB1-212ENST00000492367 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
NUCB1-212ENST00000492367 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
NUCB1-212ENST00000492367 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
NUCB1-212ENST00000492367 NEBP20929 6669 aa6.2□□□□□ -1.42
NUCB1-212ENST00000492367 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
NUCB1-212ENST00000492367 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
NUCB1-212ENST00000492367 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.44
NUCB1-212ENST00000492367 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
NUCB1-212ENST00000492367 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
NUCB1-212ENST00000492367 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
NUCB1-212ENST00000492367 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
NUCB1-212ENST00000492367 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
NUCB1-212ENST00000492367 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
NUCB1-212ENST00000492367 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
NUCB1-212ENST00000492367 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
NUCB1-212ENST00000492367 MT1AP04731 61 aa5.81□□□□□ -1.48
NUCB1-212ENST00000492367 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
NUCB1-212ENST00000492367 KRTAP5-4Q6L8H1 288 aa5.74□□□□□ -1.49
NUCB1-212ENST00000492367 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
NUCB1-212ENST00000492367 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
NUCB1-212ENST00000492367 MT4P47944 62 aa5.53□□□□□ -1.52
NUCB1-212ENST00000492367 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
NUCB1-212ENST00000492367 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
NUCB1-212ENST00000492367 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
NUCB1-212ENST00000492367 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
NUCB1-212ENST00000492367 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
NUCB1-212ENST00000492367 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
NUCB1-212ENST00000492367 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
NUCB1-212ENST00000492367 MT3P25713 68 aa5.29□□□□□ -1.56
NUCB1-212ENST00000492367 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
NUCB1-212ENST00000492367 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
NUCB1-212ENST00000492367 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
NUCB1-212ENST00000492367 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
NUCB1-212ENST00000492367 INE1O15225 51 aa4.97□□□□□ -1.61
NUCB1-212ENST00000492367 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
NUCB1-212ENST00000492367 GPR98Q8WXG9 6306 aa4.97□□□□□ -1.61
NUCB1-212ENST00000492367 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
NUCB1-212ENST00000492367 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
NUCB1-212ENST00000492367 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
NUCB1-212ENST00000492367 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
NUCB1-212ENST00000492367 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
NUCB1-212ENST00000492367 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
NUCB1-212ENST00000492367 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
NUCB1-212ENST00000492367 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
NUCB1-212ENST00000492367 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
NUCB1-212ENST00000492367 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
NUCB1-212ENST00000492367 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
NUCB1-212ENST00000492367 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
NUCB1-212ENST00000492367 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
NUCB1-212ENST00000492367 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
NUCB1-212ENST00000492367 PRM1P04553 51 aa4.11□□□□□ -1.75
NUCB1-212ENST00000492367 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
NUCB1-212ENST00000492367 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
NUCB1-212ENST00000492367 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
NUCB1-212ENST00000492367 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
NUCB1-212ENST00000492367 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
NUCB1-212ENST00000492367 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
NUCB1-212ENST00000492367 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
NUCB1-212ENST00000492367 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
NUCB1-212ENST00000492367 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
NUCB1-212ENST00000492367 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
NUCB1-212ENST00000492367 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
NUCB1-212ENST00000492367 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 215 ms