RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
SFXN5-220ENST00000490056 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
SFXN5-220ENST00000490056 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
SFXN5-220ENST00000490056 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
SFXN5-220ENST00000490056 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
SFXN5-220ENST00000490056 MT1LQ93083 61 aa5.99□□□□□ -1.45
SFXN5-220ENST00000490056 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
SFXN5-220ENST00000490056 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
SFXN5-220ENST00000490056 MT1GP13640 62 aa5.93□□□□□ -1.46
SFXN5-220ENST00000490056 MT1MQ8N339 61 aa5.87□□□□□ -1.47
SFXN5-220ENST00000490056 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
SFXN5-220ENST00000490056 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
SFXN5-220ENST00000490056 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
SFXN5-220ENST00000490056 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
SFXN5-220ENST00000490056 PMAIP1Q13794 54 aa5.77□□□□□ -1.49
SFXN5-220ENST00000490056 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
SFXN5-220ENST00000490056 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
SFXN5-220ENST00000490056 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
SFXN5-220ENST00000490056 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
SFXN5-220ENST00000490056 H3BS24 57 aa5.63□□□□□ -1.51
SFXN5-220ENST00000490056 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
SFXN5-220ENST00000490056 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
SFXN5-220ENST00000490056 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
SFXN5-220ENST00000490056 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
SFXN5-220ENST00000490056 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
SFXN5-220ENST00000490056 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
SFXN5-220ENST00000490056 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
SFXN5-220ENST00000490056 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
SFXN5-220ENST00000490056 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
SFXN5-220ENST00000490056 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
SFXN5-220ENST00000490056 MT4P47944 62 aa5.29□□□□□ -1.56
SFXN5-220ENST00000490056 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
SFXN5-220ENST00000490056 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SFXN5-220ENST00000490056 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
SFXN5-220ENST00000490056 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
SFXN5-220ENST00000490056 MT1AP04731 61 aa5.09□□□□□ -1.59
SFXN5-220ENST00000490056 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
SFXN5-220ENST00000490056 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
SFXN5-220ENST00000490056 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
SFXN5-220ENST00000490056 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
SFXN5-220ENST00000490056 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
SFXN5-220ENST00000490056 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
SFXN5-220ENST00000490056 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
SFXN5-220ENST00000490056 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
SFXN5-220ENST00000490056 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
SFXN5-220ENST00000490056 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
SFXN5-220ENST00000490056 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
SFXN5-220ENST00000490056 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
SFXN5-220ENST00000490056 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
SFXN5-220ENST00000490056 MT3P25713 68 aa4.63□□□□□ -1.67
SFXN5-220ENST00000490056 LUZP6Q538Z0 58 aa4.51□□□□□ -1.69
SFXN5-220ENST00000490056 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
SFXN5-220ENST00000490056 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
SFXN5-220ENST00000490056 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
SFXN5-220ENST00000490056 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
SFXN5-220ENST00000490056 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
SFXN5-220ENST00000490056 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
SFXN5-220ENST00000490056 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
SFXN5-220ENST00000490056 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
SFXN5-220ENST00000490056 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
SFXN5-220ENST00000490056 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
SFXN5-220ENST00000490056 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
SFXN5-220ENST00000490056 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
SFXN5-220ENST00000490056 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
SFXN5-220ENST00000490056 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SFXN5-220ENST00000490056 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
SFXN5-220ENST00000490056 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
SFXN5-220ENST00000490056 INE1O15225 51 aa3.75□□□□□ -1.81
SFXN5-220ENST00000490056 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
SFXN5-220ENST00000490056 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
SFXN5-220ENST00000490056 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
SFXN5-220ENST00000490056 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SFXN5-220ENST00000490056 PRM1P04553 51 aa3.19□□□□□ -1.9
SFXN5-220ENST00000490056 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
SFXN5-220ENST00000490056 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
SFXN5-220ENST00000490056 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
SFXN5-220ENST00000490056 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SFXN5-220ENST00000490056 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 77.6 ms