RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
SCAMP4-208ENST00000489554 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
SCAMP4-208ENST00000489554 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
SCAMP4-208ENST00000489554 SPRR2DP22532 72 aa4.1□□□□□ -1.75
SCAMP4-208ENST00000489554 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SCAMP4-208ENST00000489554 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
SCAMP4-208ENST00000489554 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
SCAMP4-208ENST00000489554 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
SCAMP4-208ENST00000489554 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
SCAMP4-208ENST00000489554 MT1EP04732 61 aa3.91□□□□□ -1.78
SCAMP4-208ENST00000489554 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
SCAMP4-208ENST00000489554 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
SCAMP4-208ENST00000489554 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
SCAMP4-208ENST00000489554 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
SCAMP4-208ENST00000489554 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
SCAMP4-208ENST00000489554 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
SCAMP4-208ENST00000489554 MT1GP13640 62 aa3.8□□□□□ -1.8
SCAMP4-208ENST00000489554 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
SCAMP4-208ENST00000489554 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
SCAMP4-208ENST00000489554 MT1LQ93083 61 aa3.73□□□□□ -1.81
SCAMP4-208ENST00000489554 MT1MQ8N339 61 aa3.72□□□□□ -1.81
SCAMP4-208ENST00000489554 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
SCAMP4-208ENST00000489554 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
SCAMP4-208ENST00000489554 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
SCAMP4-208ENST00000489554 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
SCAMP4-208ENST00000489554 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
SCAMP4-208ENST00000489554 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
SCAMP4-208ENST00000489554 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
SCAMP4-208ENST00000489554 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
SCAMP4-208ENST00000489554 MT4P47944 62 aa3.57□□□□□ -1.84
SCAMP4-208ENST00000489554 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
SCAMP4-208ENST00000489554 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
SCAMP4-208ENST00000489554 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
SCAMP4-208ENST00000489554 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
SCAMP4-208ENST00000489554 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
SCAMP4-208ENST00000489554 H3BS24 57 aa3.42□□□□□ -1.86
SCAMP4-208ENST00000489554 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
SCAMP4-208ENST00000489554 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SCAMP4-208ENST00000489554 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
SCAMP4-208ENST00000489554 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
SCAMP4-208ENST00000489554 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
SCAMP4-208ENST00000489554 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
SCAMP4-208ENST00000489554 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
SCAMP4-208ENST00000489554 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
SCAMP4-208ENST00000489554 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SCAMP4-208ENST00000489554 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
SCAMP4-208ENST00000489554 MT1AP04731 61 aa3.19□□□□□ -1.9
SCAMP4-208ENST00000489554 INE1O15225 51 aa3.16□□□□□ -1.9
SCAMP4-208ENST00000489554 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SCAMP4-208ENST00000489554 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
SCAMP4-208ENST00000489554 KRTAP9-4Q9BYQ2 154 aa3.08□□□□□ -1.92
SCAMP4-208ENST00000489554 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
SCAMP4-208ENST00000489554 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
SCAMP4-208ENST00000489554 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
SCAMP4-208ENST00000489554 MT3P25713 68 aa2.93□□□□□ -1.94
SCAMP4-208ENST00000489554 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
SCAMP4-208ENST00000489554 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
SCAMP4-208ENST00000489554 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
SCAMP4-208ENST00000489554 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
SCAMP4-208ENST00000489554 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
SCAMP4-208ENST00000489554 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
SCAMP4-208ENST00000489554 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
SCAMP4-208ENST00000489554 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
SCAMP4-208ENST00000489554 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
SCAMP4-208ENST00000489554 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
SCAMP4-208ENST00000489554 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SCAMP4-208ENST00000489554 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
SCAMP4-208ENST00000489554 PRM1P04553 51 aa2.32□□□□□ -2.04
SCAMP4-208ENST00000489554 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
SCAMP4-208ENST00000489554 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
SCAMP4-208ENST00000489554 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
SCAMP4-208ENST00000489554 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
SCAMP4-208ENST00000489554 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
SCAMP4-208ENST00000489554 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
SCAMP4-208ENST00000489554 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
SCAMP4-208ENST00000489554 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SCAMP4-208ENST00000489554 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
SCAMP4-208ENST00000489554 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms