RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 MT2AP02795 61 aa2.8□□□□□ -1.96
SF3A3-208ENST00000489537 MT1FP04733 61 aa2.8□□□□□ -1.96
SF3A3-208ENST00000489537 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
SF3A3-208ENST00000489537 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
SF3A3-208ENST00000489537 TNP1P09430 55 aa2.78□□□□□ -1.96
SF3A3-208ENST00000489537 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
SF3A3-208ENST00000489537 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
SF3A3-208ENST00000489537 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
SF3A3-208ENST00000489537 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
SF3A3-208ENST00000489537 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
SF3A3-208ENST00000489537 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
SF3A3-208ENST00000489537 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
SF3A3-208ENST00000489537 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
SF3A3-208ENST00000489537 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
SF3A3-208ENST00000489537 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
SF3A3-208ENST00000489537 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.99
SF3A3-208ENST00000489537 MT1BP07438 61 aa2.63□□□□□ -1.99
SF3A3-208ENST00000489537 NEBP20929 6669 aa2.61□□□□□ -1.99
SF3A3-208ENST00000489537 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
SF3A3-208ENST00000489537 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
SF3A3-208ENST00000489537 MT1XP80297 61 aa2.57□□□□□ -2
SF3A3-208ENST00000489537 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
SF3A3-208ENST00000489537 NDUFAF8A1L188 74 aa2.53□□□□□ -2
SF3A3-208ENST00000489537 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
SF3A3-208ENST00000489537 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
SF3A3-208ENST00000489537 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
SF3A3-208ENST00000489537 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
SF3A3-208ENST00000489537 KMT2DO14686 5537 aa2.48□□□□□ -2.01
SF3A3-208ENST00000489537 MDN1Q9NU22 5596 aa2.46□□□□□ -2.02
SF3A3-208ENST00000489537 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
SF3A3-208ENST00000489537 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
SF3A3-208ENST00000489537 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
SF3A3-208ENST00000489537 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
SF3A3-208ENST00000489537 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
SF3A3-208ENST00000489537 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SF3A3-208ENST00000489537 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
SF3A3-208ENST00000489537 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
SF3A3-208ENST00000489537 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
SF3A3-208ENST00000489537 SPRR2EP22531 72 aa2.29□□□□□ -2.04
SF3A3-208ENST00000489537 SPRR2BP35325 72 aa2.29□□□□□ -2.04
SF3A3-208ENST00000489537 SPRR2AP35326 72 aa2.29□□□□□ -2.04
SF3A3-208ENST00000489537 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
SF3A3-208ENST00000489537 MT1EP04732 61 aa2.26□□□□□ -2.05
SF3A3-208ENST00000489537 MT1LQ93083 61 aa2.24□□□□□ -2.05
SF3A3-208ENST00000489537 MT1GP13640 62 aa2.23□□□□□ -2.05
SF3A3-208ENST00000489537 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
SF3A3-208ENST00000489537 SPRR2DP22532 72 aa2.21□□□□□ -2.06
SF3A3-208ENST00000489537 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
SF3A3-208ENST00000489537 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
SF3A3-208ENST00000489537 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
SF3A3-208ENST00000489537 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
SF3A3-208ENST00000489537 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
SF3A3-208ENST00000489537 MT1MQ8N339 61 aa2.13□□□□□ -2.07
SF3A3-208ENST00000489537 INE1O15225 51 aa2.1□□□□□ -2.07
SF3A3-208ENST00000489537 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
SF3A3-208ENST00000489537 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
SF3A3-208ENST00000489537 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
SF3A3-208ENST00000489537 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
SF3A3-208ENST00000489537 MT4P47944 62 aa1.97□□□□□ -2.09
SF3A3-208ENST00000489537 MT1AP04731 61 aa1.94□□□□□ -2.1
SF3A3-208ENST00000489537 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
SF3A3-208ENST00000489537 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SF3A3-208ENST00000489537 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
SF3A3-208ENST00000489537 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
SF3A3-208ENST00000489537 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
SF3A3-208ENST00000489537 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
SF3A3-208ENST00000489537 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
SF3A3-208ENST00000489537 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
SF3A3-208ENST00000489537 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
SF3A3-208ENST00000489537 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
SF3A3-208ENST00000489537 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
SF3A3-208ENST00000489537 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
SF3A3-208ENST00000489537 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
SF3A3-208ENST00000489537 PRM1P04553 51 aa1.48□□□□□ -2.17
SF3A3-208ENST00000489537 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
SF3A3-208ENST00000489537 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
SF3A3-208ENST00000489537 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
SF3A3-208ENST00000489537 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 89.9 ms