RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
GABRE-210ENST00000489333 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
GABRE-210ENST00000489333 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
GABRE-210ENST00000489333 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
GABRE-210ENST00000489333 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
GABRE-210ENST00000489333 NEBP20929 6669 aa3.54□□□□□ -1.84
GABRE-210ENST00000489333 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
GABRE-210ENST00000489333 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
GABRE-210ENST00000489333 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
GABRE-210ENST00000489333 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
GABRE-210ENST00000489333 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
GABRE-210ENST00000489333 MT1BP07438 61 aa3.44□□□□□ -1.86
GABRE-210ENST00000489333 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
GABRE-210ENST00000489333 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
GABRE-210ENST00000489333 MT1XP80297 61 aa3.41□□□□□ -1.86
GABRE-210ENST00000489333 KRTAP12-3P60328 96 aa3.39□□□□□ -1.87
GABRE-210ENST00000489333 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
GABRE-210ENST00000489333 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
GABRE-210ENST00000489333 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
GABRE-210ENST00000489333 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
GABRE-210ENST00000489333 KMT2DO14686 5537 aa3.32□□□□□ -1.88
GABRE-210ENST00000489333 MT3P25713 68 aa3.32□□□□□ -1.88
GABRE-210ENST00000489333 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
GABRE-210ENST00000489333 INE1O15225 51 aa3.3□□□□□ -1.88
GABRE-210ENST00000489333 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
GABRE-210ENST00000489333 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
GABRE-210ENST00000489333 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
GABRE-210ENST00000489333 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
GABRE-210ENST00000489333 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
GABRE-210ENST00000489333 SPRR2EP22531 72 aa3.22□□□□□ -1.89
GABRE-210ENST00000489333 SPRR2BP35325 72 aa3.22□□□□□ -1.89
GABRE-210ENST00000489333 SPRR2AP35326 72 aa3.22□□□□□ -1.89
GABRE-210ENST00000489333 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
GABRE-210ENST00000489333 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
GABRE-210ENST00000489333 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
GABRE-210ENST00000489333 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
GABRE-210ENST00000489333 SPRR2DP22532 72 aa3.11□□□□□ -1.91
GABRE-210ENST00000489333 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
GABRE-210ENST00000489333 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
GABRE-210ENST00000489333 MT1EP04732 61 aa2.99□□□□□ -1.93
GABRE-210ENST00000489333 MT1LQ93083 61 aa2.98□□□□□ -1.93
GABRE-210ENST00000489333 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
GABRE-210ENST00000489333 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
GABRE-210ENST00000489333 MT1GP13640 62 aa2.89□□□□□ -1.95
GABRE-210ENST00000489333 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
GABRE-210ENST00000489333 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
GABRE-210ENST00000489333 MT1MQ8N339 61 aa2.79□□□□□ -1.96
GABRE-210ENST00000489333 MT4P47944 62 aa2.75□□□□□ -1.97
GABRE-210ENST00000489333 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
GABRE-210ENST00000489333 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
GABRE-210ENST00000489333 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
GABRE-210ENST00000489333 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
GABRE-210ENST00000489333 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
GABRE-210ENST00000489333 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
GABRE-210ENST00000489333 MT1AP04731 61 aa2.64□□□□□ -1.99
GABRE-210ENST00000489333 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
GABRE-210ENST00000489333 KRTAP12-4P60329 112 aa2.57□□□□□ -2
GABRE-210ENST00000489333 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
GABRE-210ENST00000489333 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
GABRE-210ENST00000489333 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
GABRE-210ENST00000489333 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
GABRE-210ENST00000489333 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
GABRE-210ENST00000489333 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
GABRE-210ENST00000489333 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
GABRE-210ENST00000489333 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
GABRE-210ENST00000489333 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
GABRE-210ENST00000489333 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
GABRE-210ENST00000489333 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
GABRE-210ENST00000489333 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
GABRE-210ENST00000489333 PRM1P04553 51 aa2.23□□□□□ -2.05
GABRE-210ENST00000489333 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
GABRE-210ENST00000489333 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
GABRE-210ENST00000489333 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
GABRE-210ENST00000489333 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
GABRE-210ENST00000489333 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
GABRE-210ENST00000489333 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
GABRE-210ENST00000489333 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
GABRE-210ENST00000489333 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms