RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	SPRR2E	P22531	72 aa		6.95	□□□□□ -1.3
PNCK-231	ENST00000488994	SPRR2B	P35325	72 aa		6.95	□□□□□ -1.3
PNCK-231	ENST00000488994	SPRR2A	P35326	72 aa		6.95	□□□□□ -1.3
PNCK-231	ENST00000488994	LCE1A	Q5T7P2	110 aa		6.93	□□□□□ -1.3
PNCK-231	ENST00000488994	KRTAP12-3	P60328	96 aa		6.9	□□□□□ -1.31
PNCK-231	ENST00000488994	KRTAP19-5	Q3LI72	72 aa		6.88	□□□□□ -1.31
PNCK-231	ENST00000488994	KRTAP19-7	Q3SYF9	63 aa		6.83	□□□□□ -1.32
PNCK-231	ENST00000488994	KRTAP2-2	Q9BYT5	123 aa		6.75	□□□□□ -1.33
PNCK-231	ENST00000488994	KRTAP2-1	Q9BYU5	128 aa		6.75	□□□□□ -1.33
PNCK-231	ENST00000488994	KRTAP15-1	Q3LI76	137 aa		6.74	□□□□□ -1.33
PNCK-231	ENST00000488994	MT1E	P04732	61 aa		6.73	□□□□□ -1.33
PNCK-231	ENST00000488994	SPRR2D	P22532	72 aa		6.72	□□□□□ -1.33
PNCK-231	ENST00000488994	KRTAP19-4	Q3LI73	84 aa		6.65	□□□□□ -1.35
PNCK-231	ENST00000488994	MT1L	Q93083	61 aa		6.58	□□□□□ -1.36
PNCK-231	ENST00000488994	LCE3B	Q5TA77	95 aa		6.56	□□□□□ -1.36
PNCK-231	ENST00000488994	KRTAP19-3	Q7Z4W3	81 aa		6.53	□□□□□ -1.36
PNCK-231	ENST00000488994	MT1G	P13640	62 aa		6.5	□□□□□ -1.37
PNCK-231	ENST00000488994	LCE5A	Q5TCM9	118 aa		6.45	□□□□□ -1.38
PNCK-231	ENST00000488994	LCE3C	Q5T5A8	94 aa		6.43	□□□□□ -1.38
PNCK-231	ENST00000488994	MT1M	Q8N339	61 aa		6.35	□□□□□ -1.39
PNCK-231	ENST00000488994	DST	Q03001	7570 aa	Known RBP	6.29	□□□□□ -1.4
PNCK-231	ENST00000488994	SPRR5	A0A1B0GTR4	108 aa		6.27	□□□□□ -1.41
PNCK-231	ENST00000488994	KRTAP4-7	Q9BYR0	210 aa		6.25	□□□□□ -1.41
PNCK-231	ENST00000488994	KRTAP4-3	Q9BYR4	195 aa		6.13	□□□□□ -1.43
PNCK-231	ENST00000488994	KRTAP4-9	Q9BYQ8	210 aa		6.08	□□□□□ -1.44
PNCK-231	ENST00000488994	LUZP6	Q538Z0	58 aa		6.08	□□□□□ -1.44
PNCK-231	ENST00000488994	GPR98	Q8WXG9	6306 aa		6.06	□□□□□ -1.44
PNCK-231	ENST00000488994	LCE4A	Q5TA78	99 aa		6	□□□□□ -1.45
PNCK-231	ENST00000488994	LCE1D	Q5T752	114 aa		5.99	□□□□□ -1.45
PNCK-231	ENST00000488994	KRTAP9-6	A8MVA2	160 aa		5.98	□□□□□ -1.45
PNCK-231	ENST00000488994	KRTAP5-4	Q6L8H1	288 aa		5.94	□□□□□ -1.46
PNCK-231	ENST00000488994	HMCN1	Q96RW7	5635 aa		5.91	□□□□□ -1.46
PNCK-231	ENST00000488994	LOC100996750	A0A140TA64	210 aa		5.89	□□□□□ -1.47
PNCK-231	ENST00000488994	MT4	P47944	62 aa		5.86	□□□□□ -1.47
PNCK-231	ENST00000488994	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.75	□□□□□ -1.49
PNCK-231	ENST00000488994	KRTAP4-6	Q9BYQ5	205 aa		5.74	□□□□□ -1.49
PNCK-231	ENST00000488994	AHNAK2	Q8IVF2	5795 aa		5.71	□□□□□ -1.5
PNCK-231	ENST00000488994	NDUFAF8	A1L188	74 aa		5.69	□□□□□ -1.5
PNCK-231	ENST00000488994	KRTAP5-10	Q6L8G5	202 aa		5.66	□□□□□ -1.5
PNCK-231	ENST00000488994	MT1A	P04731	61 aa		5.62	□□□□□ -1.51
PNCK-231	ENST00000488994	KRTAP20-2	Q3LI61	65 aa		5.56	□□□□□ -1.52
PNCK-231	ENST00000488994	KRTAP6-1	Q3LI64	71 aa		5.5	□□□□□ -1.53
PNCK-231	ENST00000488994	KRTAP5-3	Q6L8H2	238 aa		5.48	□□□□□ -1.53
PNCK-231	ENST00000488994	KRTAP12-4	P60329	112 aa		5.47	□□□□□ -1.53
PNCK-231	ENST00000488994	KRTAP5-7	Q6L8G8	165 aa		5.46	□□□□□ -1.54
PNCK-231	ENST00000488994	SYNE1	Q8NF91	8797 aa	Known RBP	5.4	□□□□□ -1.55
PNCK-231	ENST00000488994	KRTAP9-4	Q9BYQ2	154 aa		5.36	□□□□□ -1.55
PNCK-231	ENST00000488994	KRTAP5-2	Q701N4	177 aa		5.19	□□□□□ -1.58
PNCK-231	ENST00000488994	MT3	P25713	68 aa		5.14	□□□□□ -1.59
PNCK-231	ENST00000488994	KRTAP6-2	Q3LI66	62 aa		5.12	□□□□□ -1.59
PNCK-231	ENST00000488994	KRTAP4-11	Q9BYQ6	195 aa		5.1	□□□□□ -1.59
PNCK-231	ENST00000488994		A0A0A0MQY5	61 aa		5.06	□□□□□ -1.6
PNCK-231	ENST00000488994	KRTAP5-8	O75690	187 aa		4.94	□□□□□ -1.62
PNCK-231	ENST00000488994	LCE3D	Q9BYE3	92 aa		4.82	□□□□□ -1.64
PNCK-231	ENST00000488994	INE1	O15225	51 aa		4.8	□□□□□ -1.64
PNCK-231	ENST00000488994	OBSCN	Q5VST9	7968 aa		4.77	□□□□□ -1.65
PNCK-231	ENST00000488994	MUC5AC	P98088	5654 aa		4.73	□□□□□ -1.65
PNCK-231	ENST00000488994	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.73	□□□□□ -1.65
PNCK-231	ENST00000488994	AHNAK	Q09666	5890 aa	Known RBP	4.71	□□□□□ -1.66
PNCK-231	ENST00000488994	LCE3E	Q5T5B0	92 aa		4.68	□□□□□ -1.66
PNCK-231	ENST00000488994		H3BS24	57 aa		4.66	□□□□□ -1.66
PNCK-231	ENST00000488994	KRTAP5-1	Q6L8H4	278 aa		4.66	□□□□□ -1.66
PNCK-231	ENST00000488994	KRTAP9-9	Q9BYP9	154 aa		4.65	□□□□□ -1.66
PNCK-231	ENST00000488994	LCE1E	Q5T753	118 aa		4.53	□□□□□ -1.68
PNCK-231	ENST00000488994	KRTAP4-2	Q9BYR5	136 aa		4.2	□□□□□ -1.74
PNCK-231	ENST00000488994	LCE1C	Q5T751	118 aa		4.19	□□□□□ -1.74
PNCK-231	ENST00000488994	LCE1B	Q5T7P3	118 aa		4.19	□□□□□ -1.74
PNCK-231	ENST00000488994	PRM1	P04553	51 aa		3.95	□□□□□ -1.78
PNCK-231	ENST00000488994	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.91	□□□□□ -1.78
PNCK-231	ENST00000488994	KRTAP5-11	Q6L8G4	156 aa		3.75	□□□□□ -1.81
PNCK-231	ENST00000488994	KRTAP4-12	Q9BQ66	201 aa		3.72	□□□□□ -1.81
PNCK-231	ENST00000488994	LCE1F	Q5T754	118 aa		3.68	□□□□□ -1.82
PNCK-231	ENST00000488994	KRTAP21-2	Q3LI59	83 aa		3.62	□□□□□ -1.83
PNCK-231	ENST00000488994	PHGR1	C9JFL3	82 aa		3.24	□□□□□ -1.89
PNCK-231	ENST00000488994	KRTAP4-4	Q9BYR3	166 aa		3.18	□□□□□ -1.9
PNCK-231	ENST00000488994	MUC19	Q7Z5P9	8384 aa		2.96	□□□□□ -1.94
PNCK-231	ENST00000488994	KRTAP21-1	Q3LI58	79 aa		2.5	□□□□□ -2.01
PNCK-231	ENST00000488994	MUC16	Q8WXI7	14507 aa		2.11	□□□□□ -2.07

Retrieved 78 of 20,778 RNA–protein pairs in 96 ms