RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 KMT2DO14686 5537 aa5.16□□□□□ -1.58
RPL13A-212ENST00000488946 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.58
RPL13A-212ENST00000488946 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
RPL13A-212ENST00000488946 MT1EP04732 61 aa5.03□□□□□ -1.6
RPL13A-212ENST00000488946 KRTAP5-9P26371 169 aa5.02□□□□□ -1.61
RPL13A-212ENST00000488946 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
RPL13A-212ENST00000488946 MT1LQ93083 61 aa4.98□□□□□ -1.61
RPL13A-212ENST00000488946 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
RPL13A-212ENST00000488946 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
RPL13A-212ENST00000488946 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.63
RPL13A-212ENST00000488946 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
RPL13A-212ENST00000488946 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
RPL13A-212ENST00000488946 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
RPL13A-212ENST00000488946 NEBP20929 6669 aa4.86□□□□□ -1.63
RPL13A-212ENST00000488946 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
RPL13A-212ENST00000488946 SPRR2EP22531 72 aa4.81□□□□□ -1.64
RPL13A-212ENST00000488946 SPRR2BP35325 72 aa4.81□□□□□ -1.64
RPL13A-212ENST00000488946 SPRR2AP35326 72 aa4.81□□□□□ -1.64
RPL13A-212ENST00000488946 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
RPL13A-212ENST00000488946 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
RPL13A-212ENST00000488946 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
RPL13A-212ENST00000488946 MT1GP13640 62 aa4.73□□□□□ -1.65
RPL13A-212ENST00000488946 MT1MQ8N339 61 aa4.72□□□□□ -1.65
RPL13A-212ENST00000488946 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
RPL13A-212ENST00000488946 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
RPL13A-212ENST00000488946 SPRR2DP22532 72 aa4.65□□□□□ -1.66
RPL13A-212ENST00000488946 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
RPL13A-212ENST00000488946 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
RPL13A-212ENST00000488946 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
RPL13A-212ENST00000488946 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
RPL13A-212ENST00000488946 KRTAP12-4P60329 112 aa4.46□□□□□ -1.69
RPL13A-212ENST00000488946 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
RPL13A-212ENST00000488946 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
RPL13A-212ENST00000488946 MT1AP04731 61 aa4.22□□□□□ -1.73
RPL13A-212ENST00000488946 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
RPL13A-212ENST00000488946 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
RPL13A-212ENST00000488946 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
RPL13A-212ENST00000488946 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
RPL13A-212ENST00000488946 PRM1P04553 51 aa4.06□□□□□ -1.76
RPL13A-212ENST00000488946 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
RPL13A-212ENST00000488946 MT4P47944 62 aa4.04□□□□□ -1.76
RPL13A-212ENST00000488946 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
RPL13A-212ENST00000488946 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
RPL13A-212ENST00000488946 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
RPL13A-212ENST00000488946 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
RPL13A-212ENST00000488946 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
RPL13A-212ENST00000488946 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.78
RPL13A-212ENST00000488946 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
RPL13A-212ENST00000488946 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
RPL13A-212ENST00000488946 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
RPL13A-212ENST00000488946 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
RPL13A-212ENST00000488946 MT3P25713 68 aa3.79□□□□□ -1.8
RPL13A-212ENST00000488946 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
RPL13A-212ENST00000488946 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
RPL13A-212ENST00000488946 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
RPL13A-212ENST00000488946 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
RPL13A-212ENST00000488946 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
RPL13A-212ENST00000488946 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
RPL13A-212ENST00000488946 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
RPL13A-212ENST00000488946 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
RPL13A-212ENST00000488946 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
RPL13A-212ENST00000488946 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
RPL13A-212ENST00000488946 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
RPL13A-212ENST00000488946 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
RPL13A-212ENST00000488946 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
RPL13A-212ENST00000488946 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
RPL13A-212ENST00000488946 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
RPL13A-212ENST00000488946 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
RPL13A-212ENST00000488946 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
RPL13A-212ENST00000488946 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
RPL13A-212ENST00000488946 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
RPL13A-212ENST00000488946 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.98
RPL13A-212ENST00000488946 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
RPL13A-212ENST00000488946 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
RPL13A-212ENST00000488946 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
RPL13A-212ENST00000488946 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
RPL13A-212ENST00000488946 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
RPL13A-212ENST00000488946 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 391.4 ms