RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
ITSN1-229ENST00000487427 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
ITSN1-229ENST00000487427 MT1EP04732 61 aa4.63□□□□□ -1.67
ITSN1-229ENST00000487427 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
ITSN1-229ENST00000487427 A8MU10 97 aa4.56□□□□□ -1.68
ITSN1-229ENST00000487427 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
ITSN1-229ENST00000487427 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
ITSN1-229ENST00000487427 ATP5EP56381 51 aaPredicted RBP4.53□□□□□ -1.68
ITSN1-229ENST00000487427 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
ITSN1-229ENST00000487427 MT1GP13640 62 aa4.51□□□□□ -1.69
ITSN1-229ENST00000487427 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
ITSN1-229ENST00000487427 TNP1P09430 55 aa4.48□□□□□ -1.69
ITSN1-229ENST00000487427 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
ITSN1-229ENST00000487427 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
ITSN1-229ENST00000487427 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
ITSN1-229ENST00000487427 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
ITSN1-229ENST00000487427 MT1LQ93083 61 aa4.43□□□□□ -1.7
ITSN1-229ENST00000487427 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
ITSN1-229ENST00000487427 MT1MQ8N339 61 aa4.41□□□□□ -1.7
ITSN1-229ENST00000487427 TMEM258P61165 79 aa4.39□□□□□ -1.71
ITSN1-229ENST00000487427 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
ITSN1-229ENST00000487427 UQCR11O14957 56 aa4.37□□□□□ -1.71
ITSN1-229ENST00000487427 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
ITSN1-229ENST00000487427 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
ITSN1-229ENST00000487427 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
ITSN1-229ENST00000487427 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
ITSN1-229ENST00000487427 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
ITSN1-229ENST00000487427 MT4P47944 62 aa4.24□□□□□ -1.73
ITSN1-229ENST00000487427 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
ITSN1-229ENST00000487427 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
ITSN1-229ENST00000487427 K7ERS5 55 aa4.2□□□□□ -1.74
ITSN1-229ENST00000487427 V9GYY9 64 aa4.19□□□□□ -1.74
ITSN1-229ENST00000487427 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
ITSN1-229ENST00000487427 PSPHP1O15172 72 aa4.16□□□□□ -1.74
ITSN1-229ENST00000487427 Q1T7F1 81 aa4.15□□□□□ -1.75
ITSN1-229ENST00000487427 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
ITSN1-229ENST00000487427 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
ITSN1-229ENST00000487427 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
ITSN1-229ENST00000487427 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
ITSN1-229ENST00000487427 A6NED7 52 aa4.02□□□□□ -1.77
ITSN1-229ENST00000487427 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
ITSN1-229ENST00000487427 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
ITSN1-229ENST00000487427 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
ITSN1-229ENST00000487427 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
ITSN1-229ENST00000487427 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
ITSN1-229ENST00000487427 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
ITSN1-229ENST00000487427 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
ITSN1-229ENST00000487427 ROMO1P60602 79 aa3.9□□□□□ -1.79
ITSN1-229ENST00000487427 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
ITSN1-229ENST00000487427 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
ITSN1-229ENST00000487427 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
ITSN1-229ENST00000487427 MT1AP04731 61 aa3.77□□□□□ -1.81
ITSN1-229ENST00000487427 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
ITSN1-229ENST00000487427 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
ITSN1-229ENST00000487427 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
ITSN1-229ENST00000487427 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
ITSN1-229ENST00000487427 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
ITSN1-229ENST00000487427 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
ITSN1-229ENST00000487427 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
ITSN1-229ENST00000487427 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
ITSN1-229ENST00000487427 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
ITSN1-229ENST00000487427 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
ITSN1-229ENST00000487427 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
ITSN1-229ENST00000487427 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
ITSN1-229ENST00000487427 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
ITSN1-229ENST00000487427 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
ITSN1-229ENST00000487427 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
ITSN1-229ENST00000487427 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
ITSN1-229ENST00000487427 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
ITSN1-229ENST00000487427 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
ITSN1-229ENST00000487427 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
ITSN1-229ENST00000487427 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
ITSN1-229ENST00000487427 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
ITSN1-229ENST00000487427 INE1O15225 51 aa2.18□□□□□ -2.06
ITSN1-229ENST00000487427 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
ITSN1-229ENST00000487427 PRM1P04553 51 aa1.97□□□□□ -2.09
ITSN1-229ENST00000487427 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
ITSN1-229ENST00000487427 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 123.3 ms