RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 FAT1Q14517 4588 aa1.44□□□□□ -2.18
R3HDM1-217ENST00000486532 SPART-AS1P0CW21 52 aa1.44□□□□□ -2.18
R3HDM1-217ENST00000486532 DEFB136Q30KP8 78 aa1.44□□□□□ -2.18
R3HDM1-217ENST00000486532 SPINK6Q6UWN8 80 aa1.44□□□□□ -2.18
R3HDM1-217ENST00000486532 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
R3HDM1-217ENST00000486532 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
R3HDM1-217ENST00000486532 C9orf92A6NGG3 77 aa1.43□□□□□ -2.18
R3HDM1-217ENST00000486532 VPS13BQ7Z7G8 4022 aa1.43□□□□□ -2.18
R3HDM1-217ENST00000486532 DNAH6Q9C0G6 4158 aa1.43□□□□□ -2.18
R3HDM1-217ENST00000486532 A0A096LNI7 61 aa1.41□□□□□ -2.18
R3HDM1-217ENST00000486532 M0R2T5 61 aa1.41□□□□□ -2.18
R3HDM1-217ENST00000486532 DNAH2Q9P225 4427 aa1.4□□□□□ -2.19
R3HDM1-217ENST00000486532 H3BNG1 76 aa1.4□□□□□ -2.19
R3HDM1-217ENST00000486532 PKD1P98161 4303 aa1.39□□□□□ -2.19
R3HDM1-217ENST00000486532 LRP1BQ9NZR2 4599 aa1.37□□□□□ -2.19
R3HDM1-217ENST00000486532 DNAH17Q9UFH2 4485 aa1.37□□□□□ -2.19
R3HDM1-217ENST00000486532 DNAH5Q8TE73 4624 aa1.37□□□□□ -2.19
R3HDM1-217ENST00000486532 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
R3HDM1-217ENST00000486532 LINC01556Q5JQF7 62 aa1.37□□□□□ -2.19
R3HDM1-217ENST00000486532 DNAH8Q96JB1 4490 aa1.36□□□□□ -2.19
R3HDM1-217ENST00000486532 SMR3BP02814 79 aaPredicted RBP1.36□□□□□ -2.19
R3HDM1-217ENST00000486532 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
R3HDM1-217ENST00000486532 LRP1Q07954 4544 aaKnown RBP1.35□□□□□ -2.19
R3HDM1-217ENST00000486532 FAT3Q8TDW7 4589 aa1.33□□□□□ -2.2
R3HDM1-217ENST00000486532 RPS29P62273 56 aaKnown RBP1.33□□□□□ -2.2
R3HDM1-217ENST00000486532 A0A096LPF7 62 aa1.31□□□□□ -2.2
R3HDM1-217ENST00000486532 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
R3HDM1-217ENST00000486532 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
R3HDM1-217ENST00000486532 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
R3HDM1-217ENST00000486532 USH2AO75445 5202 aa1.3□□□□□ -2.2
R3HDM1-217ENST00000486532 TNXBP22105 4242 aa1.3□□□□□ -2.2
R3HDM1-217ENST00000486532 KMT2DO14686 5537 aa1.3□□□□□ -2.2
R3HDM1-217ENST00000486532 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
R3HDM1-217ENST00000486532 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
R3HDM1-217ENST00000486532 LPAP08519 4548 aa1.26□□□□□ -2.21
R3HDM1-217ENST00000486532 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
R3HDM1-217ENST00000486532 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
R3HDM1-217ENST00000486532 MT1HL1P0DM35 61 aa1.22□□□□□ -2.21
R3HDM1-217ENST00000486532 KRTAP8-1Q8IUC2 63 aa1.22□□□□□ -2.21
R3HDM1-217ENST00000486532 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
R3HDM1-217ENST00000486532 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
R3HDM1-217ENST00000486532 HTN3P15516 51 aa1.15□□□□□ -2.23
R3HDM1-217ENST00000486532 PRM1P04553 51 aa1.13□□□□□ -2.23
R3HDM1-217ENST00000486532 DEFB4AO15263 64 aa1.12□□□□□ -2.23
R3HDM1-217ENST00000486532 MUC17Q685J3 4493 aa1.11□□□□□ -2.23
R3HDM1-217ENST00000486532 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
R3HDM1-217ENST00000486532 MT1HP80294 61 aa1.09□□□□□ -2.23
R3HDM1-217ENST00000486532 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
R3HDM1-217ENST00000486532 SPRR2EP22531 72 aa1.07□□□□□ -2.24
R3HDM1-217ENST00000486532 SPRR2BP35325 72 aa1.07□□□□□ -2.24
R3HDM1-217ENST00000486532 SPRR2AP35326 72 aa1.07□□□□□ -2.24
R3HDM1-217ENST00000486532 KRTAP19-6Q3LI70 58 aa1.06□□□□□ -2.24
R3HDM1-217ENST00000486532 MT1AP04731 61 aa1.04□□□□□ -2.24
R3HDM1-217ENST00000486532 SPRR2DP22532 72 aa1.04□□□□□ -2.24
R3HDM1-217ENST00000486532 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
R3HDM1-217ENST00000486532 MUC5ACP98088 5654 aa1□□□□□ -2.25
R3HDM1-217ENST00000486532 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
R3HDM1-217ENST00000486532 SPRR2FQ96RM1 72 aa0.98□□□□□ -2.25
R3HDM1-217ENST00000486532 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
R3HDM1-217ENST00000486532 MT4P47944 62 aa0.96□□□□□ -2.26
R3HDM1-217ENST00000486532 KRTAP19-2Q3LHN2 52 aa0.96□□□□□ -2.26
R3HDM1-217ENST00000486532 MT2AP02795 61 aa0.91□□□□□ -2.26
R3HDM1-217ENST00000486532 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
R3HDM1-217ENST00000486532 MT1FP04733 61 aa0.9□□□□□ -2.27
R3HDM1-217ENST00000486532 KRTAP6-2Q3LI66 62 aa0.89□□□□□ -2.27
R3HDM1-217ENST00000486532 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
R3HDM1-217ENST00000486532 MT1EP04732 61 aa0.85□□□□□ -2.27
R3HDM1-217ENST00000486532 SPRR2GQ9BYE4 73 aa0.82□□□□□ -2.28
R3HDM1-217ENST00000486532 MT1LQ93083 61 aa0.8□□□□□ -2.28
R3HDM1-217ENST00000486532 KRTAP20-2Q3LI61 65 aa0.74□□□□□ -2.29
R3HDM1-217ENST00000486532 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
R3HDM1-217ENST00000486532 MT1BP07438 61 aa0.69□□□□□ -2.3
R3HDM1-217ENST00000486532 KRTAP19-8Q3LI54 63 aa0.69□□□□□ -2.3
R3HDM1-217ENST00000486532 MT1XP80297 61 aa0.68□□□□□ -2.3
R3HDM1-217ENST00000486532 KRTAP19-7Q3SYF9 63 aa0.57□□□□□ -2.32
R3HDM1-217ENST00000486532 MT1GP13640 62 aa0.55□□□□□ -2.32
R3HDM1-217ENST00000486532 MT1MQ8N339 61 aa0.55□□□□□ -2.32
R3HDM1-217ENST00000486532 KRTAP6-1Q3LI64 71 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 87.8 ms