RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.94
GABRE-209ENST00000486255 PRM1P04553 51 aa2.87□□□□□ -1.95
GABRE-209ENST00000486255 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
GABRE-209ENST00000486255 KRTAP4-8A0A0G2JLE6 195 aa2.81□□□□□ -1.96
GABRE-209ENST00000486255 KRTAP4-8Q9BYQ9 185 aa2.81□□□□□ -1.96
GABRE-209ENST00000486255 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
GABRE-209ENST00000486255 MT1LQ93083 61 aa2.74□□□□□ -1.97
GABRE-209ENST00000486255 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
GABRE-209ENST00000486255 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
GABRE-209ENST00000486255 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
GABRE-209ENST00000486255 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
GABRE-209ENST00000486255 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
GABRE-209ENST00000486255 MT1EP04732 61 aa2.7□□□□□ -1.98
GABRE-209ENST00000486255 MT3P25713 68 aa2.69□□□□□ -1.98
GABRE-209ENST00000486255 MUC2Q02817 5179 aa2.67□□□□□ -1.98
GABRE-209ENST00000486255 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
GABRE-209ENST00000486255 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
GABRE-209ENST00000486255 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
GABRE-209ENST00000486255 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
GABRE-209ENST00000486255 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
GABRE-209ENST00000486255 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
GABRE-209ENST00000486255 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
GABRE-209ENST00000486255 MT1MQ8N339 61 aa2.6□□□□□ -1.99
GABRE-209ENST00000486255 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
GABRE-209ENST00000486255 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
GABRE-209ENST00000486255 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2.01
GABRE-209ENST00000486255 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
GABRE-209ENST00000486255 USH2AO75445 5202 aa2.48□□□□□ -2.01
GABRE-209ENST00000486255 MT1AP04731 61 aa2.46□□□□□ -2.02
GABRE-209ENST00000486255 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
GABRE-209ENST00000486255 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
GABRE-209ENST00000486255 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
GABRE-209ENST00000486255 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
GABRE-209ENST00000486255 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
GABRE-209ENST00000486255 LCE4AQ5TA78 99 aa2.43□□□□□ -2.02
GABRE-209ENST00000486255 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
GABRE-209ENST00000486255 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
GABRE-209ENST00000486255 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
GABRE-209ENST00000486255 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
GABRE-209ENST00000486255 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
GABRE-209ENST00000486255 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
GABRE-209ENST00000486255 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
GABRE-209ENST00000486255 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
GABRE-209ENST00000486255 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
GABRE-209ENST00000486255 KMT2DO14686 5537 aa2.17□□□□□ -2.06
GABRE-209ENST00000486255 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
GABRE-209ENST00000486255 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
GABRE-209ENST00000486255 NEBP20929 6669 aa2.12□□□□□ -2.07
GABRE-209ENST00000486255 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
GABRE-209ENST00000486255 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
GABRE-209ENST00000486255 KRTAP4-6Q9BYQ5 205 aa2.01□□□□□ -2.09
GABRE-209ENST00000486255 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
GABRE-209ENST00000486255 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
GABRE-209ENST00000486255 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
GABRE-209ENST00000486255 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
GABRE-209ENST00000486255 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
GABRE-209ENST00000486255 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
GABRE-209ENST00000486255 MDN1Q9NU22 5596 aa1.9□□□□□ -2.1
GABRE-209ENST00000486255 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
GABRE-209ENST00000486255 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
GABRE-209ENST00000486255 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
GABRE-209ENST00000486255 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
GABRE-209ENST00000486255 KRTAP5-3Q6L8H2 238 aa1.73□□□□□ -2.13
GABRE-209ENST00000486255 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
GABRE-209ENST00000486255 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
GABRE-209ENST00000486255 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
GABRE-209ENST00000486255 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
GABRE-209ENST00000486255 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
GABRE-209ENST00000486255 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
GABRE-209ENST00000486255 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
GABRE-209ENST00000486255 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.19
GABRE-209ENST00000486255 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
GABRE-209ENST00000486255 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
GABRE-209ENST00000486255 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
GABRE-209ENST00000486255 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
GABRE-209ENST00000486255 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
GABRE-209ENST00000486255 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.22
GABRE-209ENST00000486255 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms