RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 A8MUU9 505 aa3.18□□□□□ -1.9
TMEM39A-209ENST00000486235 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
TMEM39A-209ENST00000486235 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
TMEM39A-209ENST00000486235 NEBP20929 6669 aa3.14□□□□□ -1.91
TMEM39A-209ENST00000486235 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
TMEM39A-209ENST00000486235 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
TMEM39A-209ENST00000486235 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
TMEM39A-209ENST00000486235 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
TMEM39A-209ENST00000486235 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
TMEM39A-209ENST00000486235 CSAG1Q6PB30 78 aa3.05□□□□□ -1.92
TMEM39A-209ENST00000486235 A0A1B0GU33 70 aa3.04□□□□□ -1.92
TMEM39A-209ENST00000486235 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
TMEM39A-209ENST00000486235 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
TMEM39A-209ENST00000486235 H0YAA0 97 aa3□□□□□ -1.93
TMEM39A-209ENST00000486235 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
TMEM39A-209ENST00000486235 ROMO1P60602 79 aa2.98□□□□□ -1.93
TMEM39A-209ENST00000486235 KMT2DO14686 5537 aa2.94□□□□□ -1.94
TMEM39A-209ENST00000486235 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
TMEM39A-209ENST00000486235 MT1BP07438 61 aa2.92□□□□□ -1.94
TMEM39A-209ENST00000486235 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
TMEM39A-209ENST00000486235 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
TMEM39A-209ENST00000486235 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
TMEM39A-209ENST00000486235 R4GN34 69 aa2.88□□□□□ -1.95
TMEM39A-209ENST00000486235 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
TMEM39A-209ENST00000486235 CRIPTQ9P021 101 aa2.86□□□□□ -1.95
TMEM39A-209ENST00000486235 S4R3F8 94 aa2.85□□□□□ -1.95
TMEM39A-209ENST00000486235 M0QZ58 72 aa2.84□□□□□ -1.95
TMEM39A-209ENST00000486235 SPRR2EP22531 72 aa2.84□□□□□ -1.95
TMEM39A-209ENST00000486235 SPRR2BP35325 72 aa2.84□□□□□ -1.95
TMEM39A-209ENST00000486235 SPRR2AP35326 72 aa2.84□□□□□ -1.95
TMEM39A-209ENST00000486235 SPRR2GQ9BYE4 73 aa2.83□□□□□ -1.96
TMEM39A-209ENST00000486235 SPRR2FQ96RM1 72 aa2.82□□□□□ -1.96
TMEM39A-209ENST00000486235 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
TMEM39A-209ENST00000486235 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
TMEM39A-209ENST00000486235 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
TMEM39A-209ENST00000486235 P0C880 135 aa2.77□□□□□ -1.97
TMEM39A-209ENST00000486235 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
TMEM39A-209ENST00000486235 A0A0D9SG42 100 aa2.74□□□□□ -1.97
TMEM39A-209ENST00000486235 SPRR2DP22532 72 aa2.74□□□□□ -1.97
TMEM39A-209ENST00000486235 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
TMEM39A-209ENST00000486235 KRTAP8-1Q8IUC2 63 aa2.73□□□□□ -1.97
TMEM39A-209ENST00000486235 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
TMEM39A-209ENST00000486235 MT1XP80297 61 aa2.68□□□□□ -1.98
TMEM39A-209ENST00000486235 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
TMEM39A-209ENST00000486235 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
TMEM39A-209ENST00000486235 PLAC4Q8WY50 150 aa2.62□□□□□ -1.99
TMEM39A-209ENST00000486235 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
TMEM39A-209ENST00000486235 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
TMEM39A-209ENST00000486235 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
TMEM39A-209ENST00000486235 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
TMEM39A-209ENST00000486235 TNP1P09430 55 aa2.51□□□□□ -2.01
TMEM39A-209ENST00000486235 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
TMEM39A-209ENST00000486235 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
TMEM39A-209ENST00000486235 MT4P47944 62 aa2.43□□□□□ -2.02
TMEM39A-209ENST00000486235 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
TMEM39A-209ENST00000486235 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
TMEM39A-209ENST00000486235 MT1EP04732 61 aa2.39□□□□□ -2.03
TMEM39A-209ENST00000486235 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
TMEM39A-209ENST00000486235 INE1O15225 51 aa2.38□□□□□ -2.03
TMEM39A-209ENST00000486235 MT1GP13640 62 aa2.32□□□□□ -2.04
TMEM39A-209ENST00000486235 MT1MQ8N339 61 aa2.3□□□□□ -2.04
TMEM39A-209ENST00000486235 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
TMEM39A-209ENST00000486235 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
TMEM39A-209ENST00000486235 MT1LQ93083 61 aa2.25□□□□□ -2.05
TMEM39A-209ENST00000486235 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
TMEM39A-209ENST00000486235 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
TMEM39A-209ENST00000486235 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
TMEM39A-209ENST00000486235 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
TMEM39A-209ENST00000486235 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
TMEM39A-209ENST00000486235 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
TMEM39A-209ENST00000486235 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
TMEM39A-209ENST00000486235 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
TMEM39A-209ENST00000486235 MT1AP04731 61 aa1.91□□□□□ -2.1
TMEM39A-209ENST00000486235 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
TMEM39A-209ENST00000486235 PRM1P04553 51 aa1.5□□□□□ -2.17
TMEM39A-209ENST00000486235 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
TMEM39A-209ENST00000486235 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
TMEM39A-209ENST00000486235 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 1187.5 ms