RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
CHMP3-207ENST00000485465 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
CHMP3-207ENST00000485465 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
CHMP3-207ENST00000485465 MT1EP04732 61 aa6.48□□□□□ -1.37
CHMP3-207ENST00000485465 MDN1Q9NU22 5596 aa6.46□□□□□ -1.37
CHMP3-207ENST00000485465 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
CHMP3-207ENST00000485465 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
CHMP3-207ENST00000485465 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
CHMP3-207ENST00000485465 NEBP20929 6669 aa6.41□□□□□ -1.38
CHMP3-207ENST00000485465 SPRR2EP22531 72 aa6.41□□□□□ -1.38
CHMP3-207ENST00000485465 SPRR2BP35325 72 aa6.41□□□□□ -1.38
CHMP3-207ENST00000485465 SPRR2AP35326 72 aa6.41□□□□□ -1.38
CHMP3-207ENST00000485465 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.38
CHMP3-207ENST00000485465 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
CHMP3-207ENST00000485465 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
CHMP3-207ENST00000485465 MT1LQ93083 61 aa6.28□□□□□ -1.4
CHMP3-207ENST00000485465 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
CHMP3-207ENST00000485465 MT1GP13640 62 aa6.22□□□□□ -1.41
CHMP3-207ENST00000485465 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
CHMP3-207ENST00000485465 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
CHMP3-207ENST00000485465 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
CHMP3-207ENST00000485465 SPRR2DP22532 72 aa6.18□□□□□ -1.42
CHMP3-207ENST00000485465 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
CHMP3-207ENST00000485465 MT1MQ8N339 61 aa6.12□□□□□ -1.43
CHMP3-207ENST00000485465 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
CHMP3-207ENST00000485465 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
CHMP3-207ENST00000485465 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
CHMP3-207ENST00000485465 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
CHMP3-207ENST00000485465 KRTAP4-2Q9BYR5 136 aa5.99□□□□□ -1.45
CHMP3-207ENST00000485465 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
CHMP3-207ENST00000485465 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
CHMP3-207ENST00000485465 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
CHMP3-207ENST00000485465 KRTAP2-1Q9BYU5 128 aa5.86□□□□□ -1.47
CHMP3-207ENST00000485465 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
CHMP3-207ENST00000485465 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
CHMP3-207ENST00000485465 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
CHMP3-207ENST00000485465 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
CHMP3-207ENST00000485465 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
CHMP3-207ENST00000485465 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
CHMP3-207ENST00000485465 MT4P47944 62 aa5.37□□□□□ -1.55
CHMP3-207ENST00000485465 MT1AP04731 61 aa5.35□□□□□ -1.55
CHMP3-207ENST00000485465 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
CHMP3-207ENST00000485465 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
CHMP3-207ENST00000485465 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
CHMP3-207ENST00000485465 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
CHMP3-207ENST00000485465 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
CHMP3-207ENST00000485465 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
CHMP3-207ENST00000485465 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
CHMP3-207ENST00000485465 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
CHMP3-207ENST00000485465 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
CHMP3-207ENST00000485465 AHNAK2Q8IVF2 5795 aa4.89□□□□□ -1.63
CHMP3-207ENST00000485465 MT3P25713 68 aa4.87□□□□□ -1.63
CHMP3-207ENST00000485465 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
CHMP3-207ENST00000485465 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
CHMP3-207ENST00000485465 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
CHMP3-207ENST00000485465 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
CHMP3-207ENST00000485465 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
CHMP3-207ENST00000485465 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
CHMP3-207ENST00000485465 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
CHMP3-207ENST00000485465 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
CHMP3-207ENST00000485465 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
CHMP3-207ENST00000485465 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
CHMP3-207ENST00000485465 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
CHMP3-207ENST00000485465 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
CHMP3-207ENST00000485465 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
CHMP3-207ENST00000485465 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CHMP3-207ENST00000485465 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
CHMP3-207ENST00000485465 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
CHMP3-207ENST00000485465 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
CHMP3-207ENST00000485465 INE1O15225 51 aa3.88□□□□□ -1.79
CHMP3-207ENST00000485465 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
CHMP3-207ENST00000485465 PRM1P04553 51 aa3.51□□□□□ -1.85
CHMP3-207ENST00000485465 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
CHMP3-207ENST00000485465 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
CHMP3-207ENST00000485465 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
CHMP3-207ENST00000485465 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
CHMP3-207ENST00000485465 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CHMP3-207ENST00000485465 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 104.8 ms