RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 SPRR2EP22531 72 aa5.18□□□□□ -1.58
SRSF6-202ENST00000483871 SPRR2BP35325 72 aa5.18□□□□□ -1.58
SRSF6-202ENST00000483871 SPRR2AP35326 72 aa5.18□□□□□ -1.58
SRSF6-202ENST00000483871 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
SRSF6-202ENST00000483871 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
SRSF6-202ENST00000483871 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
SRSF6-202ENST00000483871 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
SRSF6-202ENST00000483871 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
SRSF6-202ENST00000483871 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
SRSF6-202ENST00000483871 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
SRSF6-202ENST00000483871 MT1LQ93083 61 aa5.04□□□□□ -1.6
SRSF6-202ENST00000483871 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
SRSF6-202ENST00000483871 SPRR2DP22532 72 aa4.99□□□□□ -1.61
SRSF6-202ENST00000483871 MT1GP13640 62 aa4.98□□□□□ -1.61
SRSF6-202ENST00000483871 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
SRSF6-202ENST00000483871 MT1MQ8N339 61 aa4.92□□□□□ -1.62
SRSF6-202ENST00000483871 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
SRSF6-202ENST00000483871 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
SRSF6-202ENST00000483871 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
SRSF6-202ENST00000483871 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
SRSF6-202ENST00000483871 KRTAP2-3P0C7H8 128 aa4.85□□□□□ -1.63
SRSF6-202ENST00000483871 KRTAP2-4Q9BYR9 128 aa4.85□□□□□ -1.63
SRSF6-202ENST00000483871 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
SRSF6-202ENST00000483871 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
SRSF6-202ENST00000483871 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
SRSF6-202ENST00000483871 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
SRSF6-202ENST00000483871 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
SRSF6-202ENST00000483871 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
SRSF6-202ENST00000483871 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
SRSF6-202ENST00000483871 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
SRSF6-202ENST00000483871 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
SRSF6-202ENST00000483871 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
SRSF6-202ENST00000483871 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
SRSF6-202ENST00000483871 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
SRSF6-202ENST00000483871 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
SRSF6-202ENST00000483871 MT4P47944 62 aa4.37□□□□□ -1.71
SRSF6-202ENST00000483871 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
SRSF6-202ENST00000483871 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
SRSF6-202ENST00000483871 INE1O15225 51 aa4.28□□□□□ -1.72
SRSF6-202ENST00000483871 MT1AP04731 61 aa4.28□□□□□ -1.72
SRSF6-202ENST00000483871 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
SRSF6-202ENST00000483871 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
SRSF6-202ENST00000483871 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
SRSF6-202ENST00000483871 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
SRSF6-202ENST00000483871 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
SRSF6-202ENST00000483871 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
SRSF6-202ENST00000483871 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
SRSF6-202ENST00000483871 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
SRSF6-202ENST00000483871 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
SRSF6-202ENST00000483871 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
SRSF6-202ENST00000483871 MT3P25713 68 aa3.89□□□□□ -1.79
SRSF6-202ENST00000483871 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
SRSF6-202ENST00000483871 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
SRSF6-202ENST00000483871 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
SRSF6-202ENST00000483871 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
SRSF6-202ENST00000483871 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
SRSF6-202ENST00000483871 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
SRSF6-202ENST00000483871 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
SRSF6-202ENST00000483871 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
SRSF6-202ENST00000483871 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SRSF6-202ENST00000483871 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
SRSF6-202ENST00000483871 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
SRSF6-202ENST00000483871 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
SRSF6-202ENST00000483871 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
SRSF6-202ENST00000483871 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SRSF6-202ENST00000483871 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SRSF6-202ENST00000483871 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
SRSF6-202ENST00000483871 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
SRSF6-202ENST00000483871 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
SRSF6-202ENST00000483871 PRM1P04553 51 aa2.87□□□□□ -1.95
SRSF6-202ENST00000483871 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
SRSF6-202ENST00000483871 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
SRSF6-202ENST00000483871 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
SRSF6-202ENST00000483871 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SRSF6-202ENST00000483871 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SRSF6-202ENST00000483871 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SRSF6-202ENST00000483871 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SRSF6-202ENST00000483871 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms