RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SYNE2Q8WXH0 6885 aaKnown RBP9.27□□□□□ -0.93
SHOX2-204ENST00000483851 KRTAP9-7A8MTY7 169 aa9.25□□□□□ -0.93
SHOX2-204ENST00000483851 SPRR2FQ96RM1 72 aa9.19□□□□□ -0.94
SHOX2-204ENST00000483851 KRTAP5-9P26371 169 aa9.12□□□□□ -0.95
SHOX2-204ENST00000483851 KRTAP19-3Q7Z4W3 81 aa9.11□□□□□ -0.95
SHOX2-204ENST00000483851 MT1GP13640 62 aa9.08□□□□□ -0.96
SHOX2-204ENST00000483851 KRTAP6-3Q3LI67 103 aa9.06□□□□□ -0.96
SHOX2-204ENST00000483851 A0A0A0MQY5 61 aa9.04□□□□□ -0.96
SHOX2-204ENST00000483851 KRTAP4-7Q9BYR0 210 aa8.95□□□□□ -0.98
SHOX2-204ENST00000483851 LCE5AQ5TCM9 118 aa8.94□□□□□ -0.98
SHOX2-204ENST00000483851 MUC12Q9UKN1 5478 aa8.93□□□□□ -0.98
SHOX2-204ENST00000483851 MT1MQ8N339 61 aa8.92□□□□□ -0.98
SHOX2-204ENST00000483851 KRTAP9-6A8MVA2 160 aa8.85□□□□□ -0.99
SHOX2-204ENST00000483851 LCE1AQ5T7P2 110 aa8.79□□□□□ -1
SHOX2-204ENST00000483851 SPRR2EP22531 72 aa8.68□□□□□ -1.02
SHOX2-204ENST00000483851 SPRR2BP35325 72 aa8.68□□□□□ -1.02
SHOX2-204ENST00000483851 SPRR2AP35326 72 aa8.68□□□□□ -1.02
SHOX2-204ENST00000483851 KRTAP4-3Q9BYR4 195 aa8.67□□□□□ -1.02
SHOX2-204ENST00000483851 NEBP20929 6669 aa8.64□□□□□ -1.03
SHOX2-204ENST00000483851 MDN1Q9NU22 5596 aa8.62□□□□□ -1.03
SHOX2-204ENST00000483851 KRTAP2-3P0C7H8 128 aa8.45□□□□□ -1.06
SHOX2-204ENST00000483851 KRTAP2-4Q9BYR9 128 aa8.45□□□□□ -1.06
SHOX2-204ENST00000483851 KRTAP2-1Q9BYU5 128 aa8.45□□□□□ -1.06
SHOX2-204ENST00000483851 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.07
SHOX2-204ENST00000483851 INE1O15225 51 aa8.38□□□□□ -1.07
SHOX2-204ENST00000483851 SPRR2DP22532 72 aa8.37□□□□□ -1.07
SHOX2-204ENST00000483851 DSTQ03001 7570 aaKnown RBP8.25□□□□□ -1.09
SHOX2-204ENST00000483851 KRTAP20-1Q3LI63 56 aa8.13□□□□□ -1.11
SHOX2-204ENST00000483851 KRTAP5-5Q701N2 237 aaPredicted RBP8.06□□□□□ -1.12
SHOX2-204ENST00000483851 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
SHOX2-204ENST00000483851 MT1AP04731 61 aa7.94□□□□□ -1.14
SHOX2-204ENST00000483851 KRTAP2-2Q9BYT5 123 aa7.83□□□□□ -1.16
SHOX2-204ENST00000483851 KRTAP6-1Q3LI64 71 aa7.81□□□□□ -1.16
SHOX2-204ENST00000483851 KRTAP5-4Q6L8H1 288 aa7.66□□□□□ -1.18
SHOX2-204ENST00000483851 KRTAP9-4Q9BYQ2 154 aa7.53□□□□□ -1.2
SHOX2-204ENST00000483851 SYNE1Q8NF91 8797 aaKnown RBP7.51□□□□□ -1.21
SHOX2-204ENST00000483851 LCE4AQ5TA78 99 aa7.5□□□□□ -1.21
SHOX2-204ENST00000483851 KRTAP12-4P60329 112 aa7.47□□□□□ -1.21
SHOX2-204ENST00000483851 KRTAP4-9Q9BYQ8 210 aa7.28□□□□□ -1.24
SHOX2-204ENST00000483851 MT4P47944 62 aa7.21□□□□□ -1.25
SHOX2-204ENST00000483851 MT3P25713 68 aa7.21□□□□□ -1.26
SHOX2-204ENST00000483851 KRTAP4-6Q9BYQ5 205 aa7.19□□□□□ -1.26
SHOX2-204ENST00000483851 KRTAP6-2Q3LI66 62 aa7.18□□□□□ -1.26
SHOX2-204ENST00000483851 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
SHOX2-204ENST00000483851 KRTAP20-2Q3LI61 65 aa7.11□□□□□ -1.27
SHOX2-204ENST00000483851 HMCN1Q96RW7 5635 aa7.05□□□□□ -1.28
SHOX2-204ENST00000483851 LCE3DQ9BYE3 92 aa7.01□□□□□ -1.29
SHOX2-204ENST00000483851 KRTAP5-2Q701N4 177 aa6.97□□□□□ -1.29
SHOX2-204ENST00000483851 LCE3EQ5T5B0 92 aa6.89□□□□□ -1.31
SHOX2-204ENST00000483851 KRTAP5-3Q6L8H2 238 aa6.86□□□□□ -1.31
SHOX2-204ENST00000483851 AHNAK2Q8IVF2 5795 aa6.61□□□□□ -1.35
SHOX2-204ENST00000483851 GPR98Q8WXG9 6306 aa6.55□□□□□ -1.36
SHOX2-204ENST00000483851 OBSCNQ5VST9 7968 aa6.5□□□□□ -1.37
SHOX2-204ENST00000483851 KRTAP5-10Q6L8G5 202 aa6.4□□□□□ -1.39
SHOX2-204ENST00000483851 PRM1P04553 51 aa6.35□□□□□ -1.39
SHOX2-204ENST00000483851 LCE1EQ5T753 118 aa6.28□□□□□ -1.4
SHOX2-204ENST00000483851 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
SHOX2-204ENST00000483851 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
SHOX2-204ENST00000483851 KRTAP5-1Q6L8H4 278 aa5.98□□□□□ -1.45
SHOX2-204ENST00000483851 KRTAP5-8O75690 187 aa5.9□□□□□ -1.46
SHOX2-204ENST00000483851 LCE1CQ5T751 118 aa5.83□□□□□ -1.48
SHOX2-204ENST00000483851 LCE1BQ5T7P3 118 aa5.83□□□□□ -1.48
SHOX2-204ENST00000483851 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
SHOX2-204ENST00000483851 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
SHOX2-204ENST00000483851 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.49□□□□□ -1.53
SHOX2-204ENST00000483851 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
SHOX2-204ENST00000483851 MUC5BQ9HC84 5762 aaPredicted RBP5.35□□□□□ -1.55
SHOX2-204ENST00000483851 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
SHOX2-204ENST00000483851 KRTAP21-2Q3LI59 83 aa5.14□□□□□ -1.59
SHOX2-204ENST00000483851 KRTAP5-11Q6L8G4 156 aa5.13□□□□□ -1.59
SHOX2-204ENST00000483851 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
SHOX2-204ENST00000483851 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
SHOX2-204ENST00000483851 KRTAP4-4Q9BYR3 166 aa4.47□□□□□ -1.69
SHOX2-204ENST00000483851 PHGR1C9JFL3 82 aa4.39□□□□□ -1.71
SHOX2-204ENST00000483851 KRTAP21-1Q3LI58 79 aa4.03□□□□□ -1.76
SHOX2-204ENST00000483851 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
SHOX2-204ENST00000483851 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms