RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 MT1GP13640 62 aa4.7□□□□□ -1.66
RXRB-205ENST00000483821 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
RXRB-205ENST00000483821 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
RXRB-205ENST00000483821 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
RXRB-205ENST00000483821 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
RXRB-205ENST00000483821 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
RXRB-205ENST00000483821 MT1MQ8N339 61 aa4.58□□□□□ -1.68
RXRB-205ENST00000483821 SPRR2EP22531 72 aa4.57□□□□□ -1.68
RXRB-205ENST00000483821 SPRR2BP35325 72 aa4.57□□□□□ -1.68
RXRB-205ENST00000483821 SPRR2AP35326 72 aa4.57□□□□□ -1.68
RXRB-205ENST00000483821 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
RXRB-205ENST00000483821 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
RXRB-205ENST00000483821 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
RXRB-205ENST00000483821 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
RXRB-205ENST00000483821 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
RXRB-205ENST00000483821 SPRR2DP22532 72 aa4.41□□□□□ -1.7
RXRB-205ENST00000483821 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
RXRB-205ENST00000483821 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
RXRB-205ENST00000483821 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
RXRB-205ENST00000483821 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
RXRB-205ENST00000483821 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
RXRB-205ENST00000483821 NEBP20929 6669 aa4.19□□□□□ -1.74
RXRB-205ENST00000483821 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.75
RXRB-205ENST00000483821 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.75
RXRB-205ENST00000483821 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
RXRB-205ENST00000483821 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
RXRB-205ENST00000483821 MT1AP04731 61 aa4.08□□□□□ -1.76
RXRB-205ENST00000483821 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
RXRB-205ENST00000483821 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
RXRB-205ENST00000483821 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
RXRB-205ENST00000483821 A0A0A0MQY5 61 aa4□□□□□ -1.77
RXRB-205ENST00000483821 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
RXRB-205ENST00000483821 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
RXRB-205ENST00000483821 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
RXRB-205ENST00000483821 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
RXRB-205ENST00000483821 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
RXRB-205ENST00000483821 H3BS24 57 aa3.82□□□□□ -1.8
RXRB-205ENST00000483821 MT4P47944 62 aa3.79□□□□□ -1.8
RXRB-205ENST00000483821 INE1O15225 51 aa3.75□□□□□ -1.81
RXRB-205ENST00000483821 MT3P25713 68 aa3.74□□□□□ -1.81
RXRB-205ENST00000483821 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
RXRB-205ENST00000483821 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
RXRB-205ENST00000483821 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
RXRB-205ENST00000483821 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
RXRB-205ENST00000483821 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
RXRB-205ENST00000483821 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
RXRB-205ENST00000483821 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
RXRB-205ENST00000483821 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
RXRB-205ENST00000483821 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
RXRB-205ENST00000483821 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
RXRB-205ENST00000483821 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
RXRB-205ENST00000483821 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
RXRB-205ENST00000483821 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
RXRB-205ENST00000483821 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
RXRB-205ENST00000483821 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
RXRB-205ENST00000483821 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
RXRB-205ENST00000483821 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
RXRB-205ENST00000483821 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
RXRB-205ENST00000483821 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
RXRB-205ENST00000483821 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
RXRB-205ENST00000483821 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
RXRB-205ENST00000483821 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
RXRB-205ENST00000483821 PRM1P04553 51 aa2.97□□□□□ -1.93
RXRB-205ENST00000483821 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
RXRB-205ENST00000483821 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
RXRB-205ENST00000483821 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
RXRB-205ENST00000483821 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
RXRB-205ENST00000483821 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
RXRB-205ENST00000483821 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
RXRB-205ENST00000483821 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
RXRB-205ENST00000483821 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
RXRB-205ENST00000483821 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
RXRB-205ENST00000483821 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
RXRB-205ENST00000483821 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
RXRB-205ENST00000483821 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
RXRB-205ENST00000483821 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
RXRB-205ENST00000483821 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
RXRB-205ENST00000483821 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 187 ms