RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
SND1-210ENST00000483503 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
SND1-210ENST00000483503 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
SND1-210ENST00000483503 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
SND1-210ENST00000483503 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
SND1-210ENST00000483503 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
SND1-210ENST00000483503 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
SND1-210ENST00000483503 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
SND1-210ENST00000483503 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SND1-210ENST00000483503 MT1EP04732 61 aa4.27□□□□□ -1.73
SND1-210ENST00000483503 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
SND1-210ENST00000483503 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
SND1-210ENST00000483503 MT1LQ93083 61 aa4.22□□□□□ -1.73
SND1-210ENST00000483503 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
SND1-210ENST00000483503 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
SND1-210ENST00000483503 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
SND1-210ENST00000483503 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
SND1-210ENST00000483503 MT1GP13640 62 aa4.07□□□□□ -1.76
SND1-210ENST00000483503 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
SND1-210ENST00000483503 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
SND1-210ENST00000483503 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SND1-210ENST00000483503 MT1MQ8N339 61 aa4.01□□□□□ -1.77
SND1-210ENST00000483503 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
SND1-210ENST00000483503 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
SND1-210ENST00000483503 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
SND1-210ENST00000483503 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
SND1-210ENST00000483503 SPRR2EP22531 72 aa3.94□□□□□ -1.78
SND1-210ENST00000483503 SPRR2BP35325 72 aa3.94□□□□□ -1.78
SND1-210ENST00000483503 SPRR2AP35326 72 aa3.94□□□□□ -1.78
SND1-210ENST00000483503 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
SND1-210ENST00000483503 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
SND1-210ENST00000483503 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.8
SND1-210ENST00000483503 SPRR2DP22532 72 aa3.83□□□□□ -1.8
SND1-210ENST00000483503 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
SND1-210ENST00000483503 INE1O15225 51 aa3.82□□□□□ -1.8
SND1-210ENST00000483503 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
SND1-210ENST00000483503 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
SND1-210ENST00000483503 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
SND1-210ENST00000483503 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
SND1-210ENST00000483503 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
SND1-210ENST00000483503 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
SND1-210ENST00000483503 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
SND1-210ENST00000483503 MT1AP04731 61 aa3.6□□□□□ -1.83
SND1-210ENST00000483503 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
SND1-210ENST00000483503 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
SND1-210ENST00000483503 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
SND1-210ENST00000483503 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
SND1-210ENST00000483503 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
SND1-210ENST00000483503 MT4P47944 62 aa3.44□□□□□ -1.86
SND1-210ENST00000483503 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
SND1-210ENST00000483503 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
SND1-210ENST00000483503 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
SND1-210ENST00000483503 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
SND1-210ENST00000483503 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
SND1-210ENST00000483503 MT3P25713 68 aa3.28□□□□□ -1.88
SND1-210ENST00000483503 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
SND1-210ENST00000483503 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
SND1-210ENST00000483503 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
SND1-210ENST00000483503 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
SND1-210ENST00000483503 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SND1-210ENST00000483503 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
SND1-210ENST00000483503 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
SND1-210ENST00000483503 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
SND1-210ENST00000483503 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
SND1-210ENST00000483503 PRM1P04553 51 aa2.87□□□□□ -1.95
SND1-210ENST00000483503 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
SND1-210ENST00000483503 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
SND1-210ENST00000483503 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
SND1-210ENST00000483503 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
SND1-210ENST00000483503 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
SND1-210ENST00000483503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
SND1-210ENST00000483503 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
SND1-210ENST00000483503 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
SND1-210ENST00000483503 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
SND1-210ENST00000483503 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
SND1-210ENST00000483503 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SND1-210ENST00000483503 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
SND1-210ENST00000483503 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 66.6 ms