RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
PHGDH-205ENST00000482968 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
PHGDH-205ENST00000482968 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
PHGDH-205ENST00000482968 KMT2DO14686 5537 aa5.86□□□□□ -1.47
PHGDH-205ENST00000482968 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
PHGDH-205ENST00000482968 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
PHGDH-205ENST00000482968 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
PHGDH-205ENST00000482968 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
PHGDH-205ENST00000482968 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
PHGDH-205ENST00000482968 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
PHGDH-205ENST00000482968 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
PHGDH-205ENST00000482968 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
PHGDH-205ENST00000482968 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
PHGDH-205ENST00000482968 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
PHGDH-205ENST00000482968 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
PHGDH-205ENST00000482968 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
PHGDH-205ENST00000482968 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
PHGDH-205ENST00000482968 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
PHGDH-205ENST00000482968 MT1EP04732 61 aa5.5□□□□□ -1.53
PHGDH-205ENST00000482968 MUC12Q9UKN1 5478 aa5.47□□□□□ -1.53
PHGDH-205ENST00000482968 SPRR2EP22531 72 aa5.36□□□□□ -1.55
PHGDH-205ENST00000482968 SPRR2BP35325 72 aa5.36□□□□□ -1.55
PHGDH-205ENST00000482968 SPRR2AP35326 72 aa5.36□□□□□ -1.55
PHGDH-205ENST00000482968 MT1LQ93083 61 aa5.36□□□□□ -1.55
PHGDH-205ENST00000482968 INE1O15225 51 aa5.35□□□□□ -1.55
PHGDH-205ENST00000482968 LCE1AQ5T7P2 110 aa5.35□□□□□ -1.55
PHGDH-205ENST00000482968 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
PHGDH-205ENST00000482968 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.56
PHGDH-205ENST00000482968 MT1GP13640 62 aa5.27□□□□□ -1.57
PHGDH-205ENST00000482968 MT1MQ8N339 61 aa5.2□□□□□ -1.58
PHGDH-205ENST00000482968 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
PHGDH-205ENST00000482968 SPRR2DP22532 72 aa5.16□□□□□ -1.58
PHGDH-205ENST00000482968 NEBP20929 6669 aa5.16□□□□□ -1.58
PHGDH-205ENST00000482968 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
PHGDH-205ENST00000482968 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
PHGDH-205ENST00000482968 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
PHGDH-205ENST00000482968 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
PHGDH-205ENST00000482968 KRTAP20-1Q3LI63 56 aa4.91□□□□□ -1.62
PHGDH-205ENST00000482968 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
PHGDH-205ENST00000482968 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
PHGDH-205ENST00000482968 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
PHGDH-205ENST00000482968 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
PHGDH-205ENST00000482968 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
PHGDH-205ENST00000482968 MT1AP04731 61 aa4.55□□□□□ -1.68
PHGDH-205ENST00000482968 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
PHGDH-205ENST00000482968 MT4P47944 62 aa4.5□□□□□ -1.69
PHGDH-205ENST00000482968 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
PHGDH-205ENST00000482968 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
PHGDH-205ENST00000482968 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
PHGDH-205ENST00000482968 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
PHGDH-205ENST00000482968 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
PHGDH-205ENST00000482968 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
PHGDH-205ENST00000482968 MT3P25713 68 aa4.14□□□□□ -1.75
PHGDH-205ENST00000482968 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
PHGDH-205ENST00000482968 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
PHGDH-205ENST00000482968 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
PHGDH-205ENST00000482968 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.78
PHGDH-205ENST00000482968 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
PHGDH-205ENST00000482968 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
PHGDH-205ENST00000482968 LCE1EQ5T753 118 aa3.84□□□□□ -1.8
PHGDH-205ENST00000482968 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
PHGDH-205ENST00000482968 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
PHGDH-205ENST00000482968 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
PHGDH-205ENST00000482968 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
PHGDH-205ENST00000482968 PRM1P04553 51 aa3.65□□□□□ -1.83
PHGDH-205ENST00000482968 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
PHGDH-205ENST00000482968 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
PHGDH-205ENST00000482968 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
PHGDH-205ENST00000482968 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
PHGDH-205ENST00000482968 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
PHGDH-205ENST00000482968 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
PHGDH-205ENST00000482968 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
PHGDH-205ENST00000482968 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
PHGDH-205ENST00000482968 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
PHGDH-205ENST00000482968 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
PHGDH-205ENST00000482968 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
PHGDH-205ENST00000482968 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
PHGDH-205ENST00000482968 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms